Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2734 |
Symbol | |
ID | 4114833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2746283 |
End bp | 2747449 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638037507 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_645461 |
Protein GI | 108805524 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.609688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCCGC TCGAGGGCAT AACGGTCGTC TCCGTGGAGC AGGCTGTCGC CGCTCCCCTC GCCACCCGCC AGCTCGCCGA GCTGGGGGCC AGGGTGATAA AGGTGGAGCG GCCCGGCGGG GACTTCGCCC GCCGCTACGA CCGGACAGTG AAGGGGCTCT CGAGCCACTT CGTGTGGCTC AACCGCTCCA AGGAGTCCGT GGTTTTGGAC CTCAAGAAGG AGGCGGCCAG GGAGGTTCTG CGCCGCCTGA TCTCGCGCGC CGACGTCTTC GTGCAGAACC TCGCCCCCGG GGCCGCCGAA CGGCTGGGCT TCGGGGCGCG GAGGCTCGGG GAGGAGCATC CCCGCCTCGT CGCCTGCTCC ATCTCCGGCT ACGGCTACAG CGGCCCCTAC CGGGACAGGA AGGCCTACGA CCTGCTGGTG CAGTGCGAGG CAGGGCTCCT CTCCATCACC GGCACCGAAG AGACCCCCTC CAAGGTGGGC ATCTCGGTTG CGGACATAGC GGCGGGAATG TACGCCTACT CGGGGATCCT CGCCGCCCTC TTCCGTCGGG AGCGCACCGG CGAGGGAGCC GCGCTCGAGG TCTCGCTCTT CGAGGCGCTC TCCGAGTGGA TGGGCTACCC GCTCTACTAC ACGCTCTACG GCGGCAGGCA GCCGCCGCGC ACCGGGGCGG AGCACGCGGC CATCGCACCC TACGGGCCCT ACCGGTGCTC GGGCGGGACG GTGTTTCTGG GCATCCAGAA CGAGCGGGAG TGGGAGCGCT TCTGCGGCGA GGTGCTGGGG AGGCCCGGCC TCGCCGGCGA CCCCCGCTTC GCGGACAACC CCTCGCGCGT GGCGAACCGC GGGGAGCTGC GCGAGGAGAT AGAGGCGGTC TTCGGGAGGC TCTCCCCGGA GGAGGTCGAG GGGAGGCTCG AGGCGGCGGG GATAGCCAGC GCCCGGCTGC GCGACGTGGA GGGGCTCATC GGTCACCCGC AGCTCGAGGC CCGCGGGCGC TGGCGGGAGG TGTGCTCCCC GGCCGGCCCC CTGCGGGCGC TGCTTCCCCC GGTGCTCTTC GGGGAGGAGC CGGCGATGGG GCCCGTCCCG GAGGCCGGGG AGCACACCGT GCGGGTCTTG AGGGAGCTGG GCTTTGCGCC GCGGGAGGCG GAGAGGCTCG CGCGGGATCT CGGGTAG
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Protein sequence | MLPLEGITVV SVEQAVAAPL ATRQLAELGA RVIKVERPGG DFARRYDRTV KGLSSHFVWL NRSKESVVLD LKKEAAREVL RRLISRADVF VQNLAPGAAE RLGFGARRLG EEHPRLVACS ISGYGYSGPY RDRKAYDLLV QCEAGLLSIT GTEETPSKVG ISVADIAAGM YAYSGILAAL FRRERTGEGA ALEVSLFEAL SEWMGYPLYY TLYGGRQPPR TGAEHAAIAP YGPYRCSGGT VFLGIQNERE WERFCGEVLG RPGLAGDPRF ADNPSRVANR GELREEIEAV FGRLSPEEVE GRLEAAGIAS ARLRDVEGLI GHPQLEARGR WREVCSPAGP LRALLPPVLF GEEPAMGPVP EAGEHTVRVL RELGFAPREA ERLARDLG
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