Gene Rxyl_2340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2340 
Symbol 
ID4115606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2349364 
End bp2350377 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content66% 
IMG OID638037120 
Producthypothetical protein 
Protein accessionYP_645080 
Protein GI108805143 
COG category[R] General function prediction only 
COG ID[COG1735] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCCA CGGTCAACAC GGTCACCGGG CCGATCTCCT CGGAGGACCT GGGTAAGACG 
CTGGTGCACG AGCACTTCAT GTTCGGGTAC CCCGGCTACC AGGGCGACAC GACCCTCGGG
CCCTTCGACC GGGAGGAGGC CGTCCGGGTG GGGGTGGCGG TGGCCGAGCG GGCCAAGTCC
CACGGGGTCA AGACCATCAT CGACGCCACC CCCAACGAGT GCGGGCGCGA CGTGGAGGTT
TTGCGCGAGA TCTCCGAGCG GGCGGAGATA CAGATAGTGT GCTCCACCGG CTACTACTAC
GAGGGGGAGG GAGCACCCGC ATACTTCAAC TTCCGCCGCT CCCTCGGCAC CGCGGAGGAG
GAGATCTACG AGATGCTCTC CACGGAGGTC GTAGAGGGGA TAGCCGGGAC CGGGATAAAG
GCCGGGGTGA TAAAGCTGGC CTCCAGCAAG GACGCCATCA CCGACTACGA AGCTATGTTC
TTCCGCTGCG GGGCCCGAGT GCAAAAGGAG ACTGGCACAC CGATCATCAC CCACACCCAG
GAGGGGACGA TGGGCCCGGA GCAGGCAGAG TTGCTGATCT CCGAGGGCGC GGACCCGCGC
AGGTGTCAGA TCGGGCACAT GGACGGCAAC ACGGACGTCG TCTACCACAT GAACACCCTG
GAGCACGGGG TAAACATAGC CTTCGACCGC TTCGGGATAC AGGGGATCGT GGGCGCCCCG
ATGGACGAGG CGCGCACCGC CTGCCTCATA GGTCTGCTGG GGATGGGCTA CACGGACCGC
ATCCTGCTCT CCCACGACAC GGTGAACCTC TGGCTGGGGC GCCCGCTCCG GATGCCGGAG
CAGCTGCAGC AGCTGCTGGC CAACTGGCAC ATAGGCCACC TCTTCGAGAA CGTAGTGCCG
AAGCTCCGGC GGGCGGGGGT CACCGAGGAG CAGATAGAGA CCATCTTCGT CGAGAACCCG
AAGCGGCTCT TCGACCCCCT GCCCGTGCGG GAGGCCGCCG GAGCCGCCGG CTAG
 
Protein sequence
MAATVNTVTG PISSEDLGKT LVHEHFMFGY PGYQGDTTLG PFDREEAVRV GVAVAERAKS 
HGVKTIIDAT PNECGRDVEV LREISERAEI QIVCSTGYYY EGEGAPAYFN FRRSLGTAEE
EIYEMLSTEV VEGIAGTGIK AGVIKLASSK DAITDYEAMF FRCGARVQKE TGTPIITHTQ
EGTMGPEQAE LLISEGADPR RCQIGHMDGN TDVVYHMNTL EHGVNIAFDR FGIQGIVGAP
MDEARTACLI GLLGMGYTDR ILLSHDTVNL WLGRPLRMPE QLQQLLANWH IGHLFENVVP
KLRRAGVTEE QIETIFVENP KRLFDPLPVR EAAGAAG