| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2271 |
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| Symbol | |
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| ID | 4115214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2281758 |
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| End bp | 2283401 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638037050 |
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| Product | thiamine pyrophosphate enzyme-like TPP binding region |
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| Protein accession | YP_645013 |
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| Protein GI | 108805076 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGTCT GCCAAGCGAT CGGTCAGGTG CTCGCCGACC GGGGTGTGGA GGTGTTCTTC
GGGCTCGTCG GCAGCGGAAA CTTCACCGTG GTGGACGCCC TGCAGAAGGC CGGGGCGAAA
TTCTACTCCG CGCGCCACGA GTGCGGAGCG GTGATGATGG CCGACGGGTA CGCGAGAGCG
AGCGGGAAGG TGGGCGTGTG CAGCACCCAC CAGGGGCCGG GGTTCACGAA CGCCCTGACC
GGGCTGACGG AGGCCGCGAA GAACCGCACC CCTCTGCTGT TGCTCGCCGC CGACACGCCA
CCGGAGACCC TCTGGTCGAA CTTCAAGATA GACCAGGGCG CAATAGCCGA GAGAGCCGGG
GCCGTCGCCG AGCGGGTGCG CTCTCCCGAA ACCGCCGCCG AAGACACCGC CCGCGCGTTG
CGCCGAACGC AGGTCGAACG CCGCCCCGTG GTGCTCAACA TCCCGATAAA CCTCGCGGAG
ATGCCCTGTC CCGACGAGCC GCAGATGCCC GACGTGCCGG AGCTGGAGCC GCCGCGTCCG
GGGGAGCGTT CGGTCGCCAG GGCCGCGGAC CTGCTCGAAA CTTCGGAGCG GCCCGTGATC
CTGGCTGGCC GCGGGGCCGT TCTCTCCGGA GCGCGAAAGG AGCTGGAGGC GCTCGCGGAG
AGGGTCGGGG CGCTTCTGGC GACGACCGCG ATGGGTCACG GGCTGTTTGC CGGGAACCCG
TACTGCGTGG GCATCGCGGG CGGCTTCTCT TCGCCGCTCG CCGTCGAGCT GCTCTCCCGC
GTGGATCTCG TGCTCGCGTT CGGCGCCTCG CTCAACCGCT GGACCGTCCG CCACGGCAGG
CTTTTCCCGC CCGAGGCGCG CGTCGTACAG GTGGATCTGG ACGAGGAGGC GATCGGCGCT
CTGCACCGGG TAGACGCCGG GGTCGTCGGC GACGCCGCGG CGAGCGCGAG GGATATGGTA
CGGGAGCTGG AGCGCCGCGG CGTGCGGAAG AGCGGCCTCC GCGGCGAGGA GATGGAGCGT
GAGATCTCGG CCCGCCGCTG GCGCGATGAG CCCTACGAGG ACGAGGGAAC CCCCGAGTCC
ATAGACCCGC GCACGCTGAG CATCGCGCTC GACGACCTCT TGCCGGAGGA GCGCACGGTC
GCCACCGACT CCGGGCACTT CCTGGGCTAC CCGGCGATGT ACCTGAGCGT CCCCGACGAG
CGGGGCTTCG TGTTCCCGAA CGCCTTCCAG TCGGTGGGGC TGGGGCTCGG CAGCGGCATC
GGCGCGGCGA TAGCCCGCCC GGACAGGATC TCCGTGGCCG CCATCGGGGA CGGCGGCGCG
CTCATGGCCC TGGGAGAGCT GGAGACGGCG GCGCGCTACC GGCTGCCGAT GGTGGTTTTG
ATCTACAACG ACGCCGCCTA CGGCGCGGAG GTCCACCACT TCGGCCCGAT GGGACACCCC
GTGGACTCCG TGCGCTTCCC TGACACCGAC TTCGCCGCCC TCGCCGGCGC GGCGGGAGCC
ACGGGCATCA CCGTCCGCTC CCCCGACGAC CTCGCGCCAC TCAAGGAGTG GCTCGGCAGA
CGCGACGGGC CGCTCGTCAT AGACGCCAAG GTCAACCCCG ACGTGCGGGC CGAATGGCTC
GAAGAAGCGT TCCGCGCACA CTGA
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| Protein sequence | MRVCQAIGQV LADRGVEVFF GLVGSGNFTV VDALQKAGAK FYSARHECGA VMMADGYARA
SGKVGVCSTH QGPGFTNALT GLTEAAKNRT PLLLLAADTP PETLWSNFKI DQGAIAERAG
AVAERVRSPE TAAEDTARAL RRTQVERRPV VLNIPINLAE MPCPDEPQMP DVPELEPPRP
GERSVARAAD LLETSERPVI LAGRGAVLSG ARKELEALAE RVGALLATTA MGHGLFAGNP
YCVGIAGGFS SPLAVELLSR VDLVLAFGAS LNRWTVRHGR LFPPEARVVQ VDLDEEAIGA
LHRVDAGVVG DAAASARDMV RELERRGVRK SGLRGEEMER EISARRWRDE PYEDEGTPES
IDPRTLSIAL DDLLPEERTV ATDSGHFLGY PAMYLSVPDE RGFVFPNAFQ SVGLGLGSGI
GAAIARPDRI SVAAIGDGGA LMALGELETA ARYRLPMVVL IYNDAAYGAE VHHFGPMGHP
VDSVRFPDTD FAALAGAAGA TGITVRSPDD LAPLKEWLGR RDGPLVIDAK VNPDVRAEWL
EEAFRAH
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