Gene Rxyl_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2175 
Symbol 
ID4114790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp2189931 
End bp2190428 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content74% 
IMG OID638036966 
Product2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_644931 
Protein GI108804994 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.243742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGGGCT ACCGGGTGGG GCTCGGGGTG GACGTGCACG CCTTCGCCGA TCCCGCCGAG 
GGCCGCCAGC TCGTGCTCGG CGGGGTCCGG ATCCCCTCGG AGCGCGGGCT CCGGGGCCAC 
TCCGACGCCG ACGTGCTGGC CCACGCGGTC ACCGACGCGC TGCTCGGGGC GGCGGGGCTT 
GAGGACATCG GCCACTACTT CCCGGACACC GATGAGCGTT TTCGGGACGC TGACTCCATC 
TGGCTGTTGC GCGAGGCGCG CCGGATCGTC GGCGGGGGCT GGGAGGTGGT CAACGTGGAC 
GCCGTGGTCA TCTGCGAGCG GCCCAGGATC CGCGAGCACC GCGAGAAGAT GCGCGAGAAC 
CTCGCCGCCG CCCTTGGCGT GGAGGCGTCG CGCGTGAGCG TCCGGGGCAC CACGAGCGAG 
CGGCTGGGGT TCACGGGGCG GGGCGAGGGG ATAGCGGCGC AGGCGGTGTG CCTGCTCGAG 
AGGGCCGTTG GCACCTAG
 
Protein sequence
MGGYRVGLGV DVHAFADPAE GRQLVLGGVR IPSERGLRGH SDADVLAHAV TDALLGAAGL 
EDIGHYFPDT DERFRDADSI WLLREARRIV GGGWEVVNVD AVVICERPRI REHREKMREN 
LAAALGVEAS RVSVRGTTSE RLGFTGRGEG IAAQAVCLLE RAVGT