| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2173 |
|---|
| Symbol | |
|---|
| ID | 4114788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2187237 |
|---|
| End bp | 2188649 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638036964 |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | YP_644929 |
|---|
| Protein GI | 108804992 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0883162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAA AGGTGCGGGA CAGCCTGAGC GGCGGCCTGG TGGAGGTCGG CGGCGACGGC
CGGGTCGGCA TCTACGTGTG CGGTCCCACC GTCTACAACC ACATACACAT CGGCAACGTG
CGCGGGCACC TGTTCTGGGA CGTGGCGGTC AGGTTCCTGC GCAGCCGGGG CTACCGGGTC
AAGTTCGTCT GGAACATAAC CGACATAGAC GACAAGATCA TAAACCGGGC CAACGAGGAG
GGCGTCTCCT GGAAGGAGAT CGTCCGCCGC TACACCGACT CCTTCCACGA GCGGCTGCGG
CTCTTGGGCA TCGGGATGCC CGACGTCGAG CCGCGGGCCA CCGAGCACAT CCCGGAGATG
ATCTCGCTGA TCGAGGAGCT CATCCGGCGC GGGCACGCCT ATCCGGCCCC GAACGGGGAC
GTCTACTACG CGGTGGAGAC CTTCCCCAGG TATGGTGCCC TGAGCAAGCA GCGCCCGGAG
GAGATGAAGA TCACCGAGAA AGGCCAGACC GGCCACAAGC GGAACCCGCT GGACTTCACC
CTCTGGAAGG CCTCGAAGCC CGGGGAGCCC TCCTGGGAGA GCCCCTGGGG GCCCGGCCGG
CCGGGCTGGC ACATAGAGTG CTCTGCGATG GTCGAGAAGC ACCTGCCCGG CGGGGCGGAC
ATCCACGGCG GGGGCTCCGA CATCCGCTTC CCGCACCACG AGAACGAGCT GGCCCAGAGC
TGCGGGGCGC ACCCCGACAG GCCCTTTGTC CGGGCGTGGG CCCACCACGG CATGGTCCGG
ATGGCCGCGC AGAAGATGGC CAAGAGCGTG GGCAACGTGG TGGACGCCAG GGAGGCCACC
CTGAAGCACG GCCGGGACGC CATAAGGATG TGGCTCCTGC AGAGCCACTA CTCCCAGCCC
ATAGACTACT CGGACGAGAT CCTGGAGGAG AAGCGTCGCT CCTGCGAGCG GCTGCTGAGG
CTCTACCGGG AGATCTCCCG CTCCGAGGCC TCCTCGCCGC TCTCCGACCG GCTCGCCGGG
GAGCTGCGGG AGCGCTTCGA CGCGGCCATG CGGGAGGACT TCAACACCCC CGAGGCCATC
GCGGCCCTCT TCGACGCCGC GAGCGGGGCG GGGCGCGAGA TCTCCTCCCG CCCCTCCGCC
GCCGGGGAGT TCGCCTCCCT GAAGGAGGCC CTGCAGGAGC TGCTGGGCCT CCTCGGCTTC
GACGTCGCCG GGGAGCGGGT CTCCGAGGTG GACGGGGTGC GCATCCGGCA CGCCGGCGAG
GCACCCGGCG AGGTGCTCGA GAGGGTGGCC CGGCGCGAGC GGGCCCGCCG GAGGCGGGAG
TGGCCGGAGG CCGACCGGCT GCGCGAGGAG CTTCTGCGGG AGGGCTGGGC CATAGAGGAC
ACCGCCGCGG GGCCGGTCCT GAGCCGCCGC TAG
|
|---|
| Protein sequence | MSVKVRDSLS GGLVEVGGDG RVGIYVCGPT VYNHIHIGNV RGHLFWDVAV RFLRSRGYRV
KFVWNITDID DKIINRANEE GVSWKEIVRR YTDSFHERLR LLGIGMPDVE PRATEHIPEM
ISLIEELIRR GHAYPAPNGD VYYAVETFPR YGALSKQRPE EMKITEKGQT GHKRNPLDFT
LWKASKPGEP SWESPWGPGR PGWHIECSAM VEKHLPGGAD IHGGGSDIRF PHHENELAQS
CGAHPDRPFV RAWAHHGMVR MAAQKMAKSV GNVVDAREAT LKHGRDAIRM WLLQSHYSQP
IDYSDEILEE KRRSCERLLR LYREISRSEA SSPLSDRLAG ELRERFDAAM REDFNTPEAI
AALFDAASGA GREISSRPSA AGEFASLKEA LQELLGLLGF DVAGERVSEV DGVRIRHAGE
APGEVLERVA RRERARRRRE WPEADRLREE LLREGWAIED TAAGPVLSRR
|
|---|
| |