Gene Rxyl_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2139 
Symbol 
ID4114735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2161128 
End bp2161478 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content73% 
IMG OID638036925 
Product50S ribosomal protein L18P 
Protein accessionYP_644895 
Protein GI108804958 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0432612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTCA CACGCAAGCG GGCTCAGAGG GAGAGGCGGC ACCGGCGGGT GCGGCGGAAG 
ATCTTCGGCA CGCCGGAGCG GCCGCGGCTG TCGGTGTACC GGTCGAACGT GCACACCTAC
GCCCAGCTGA TAGACGACAT AGCCGGCCAC ACCCTGGCCG CGGCGGACTC CCGCGAGGTG
GGGGAGGCCG AGAGCCGGGT GGAGGCGGCG CGCAAGGTGG GCGAGCTGAT AGCCTCCCGG
GCCCGGGAGG CCGGCATAGA GCGGGCCGTC TTCGACCGGG GCGGCTACAA GTACCACGGC
CGGGTCGCCG CGCTCGCCGA GGGCGCGCGG GCCGGCGGGC TGAAGTTCTG A
 
Protein sequence
MKVTRKRAQR ERRHRRVRRK IFGTPERPRL SVYRSNVHTY AQLIDDIAGH TLAAADSREV 
GEAESRVEAA RKVGELIASR AREAGIERAV FDRGGYKYHG RVAALAEGAR AGGLKF