Gene Rxyl_2129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2129 
Symbol 
ID4114725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2155301 
End bp2155903 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content70% 
IMG OID638036915 
ProductSSU ribosomal protein S4P 
Protein accessionYP_644885 
Protein GI108804948 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0414725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCGTT ACACGGGACC CAGGGGCCGG CGCGACCGGC GGGCCGGGGT GATGCTCTCC 
TCCATGCGCA AGAACCCGCT GGAGAAGAAG CCCTACCCGC CGGGCGAGCA CGGCCGCGAC
CGCCAGCGGC AGACGGAGTA CGGCCTCCGG CTGATGGAGA AGCAGAAGGC CCGCTGGTAC
TACGGCGTCT CCGAGCGGCA GTTCCGCCGG GCCTACGAGG AGGCCATCCG CCAGCCGGGG
GTCTCCGGCG AGAACCTGCT GCGGCTCATG GAGCTGAGGA TGGACAACGT CGTGTACCGG
ATGGGCTTCG CCACCAGCCG CCCGCAGGCG CGGCAGCTGG TGGTGCACGG GCACTTCCTG
CTCAACGGCC GCAAGCACAA CATCCCCTCG GCGACCCTCA AGCCGGGCGA TGTGATCACG
GTGCGCGACA AGAGCCGGCG GCTGCAGCCG ATACAGGAGG CCGTGGAGCA GGTCGTGGCC
GTCCCGGCCT GGCTGGAGGC CGACCACGAG AACTTCACCG GCCGGGTGCT GCACACCCCC
AGCCGGGACG AGATCGACGC TCCCGTCGAG GAGCAGCTGA TCATCGAGTT CTACAGCCGC
TAA
 
Protein sequence
MARYTGPRGR RDRRAGVMLS SMRKNPLEKK PYPPGEHGRD RQRQTEYGLR LMEKQKARWY 
YGVSERQFRR AYEEAIRQPG VSGENLLRLM ELRMDNVVYR MGFATSRPQA RQLVVHGHFL
LNGRKHNIPS ATLKPGDVIT VRDKSRRLQP IQEAVEQVVA VPAWLEADHE NFTGRVLHTP
SRDEIDAPVE EQLIIEFYSR