Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2129 |
Symbol | |
ID | 4114725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2155301 |
End bp | 2155903 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638036915 |
Product | SSU ribosomal protein S4P |
Protein accession | YP_644885 |
Protein GI | 108804948 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0414725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGCGTT ACACGGGACC CAGGGGCCGG CGCGACCGGC GGGCCGGGGT GATGCTCTCC TCCATGCGCA AGAACCCGCT GGAGAAGAAG CCCTACCCGC CGGGCGAGCA CGGCCGCGAC CGCCAGCGGC AGACGGAGTA CGGCCTCCGG CTGATGGAGA AGCAGAAGGC CCGCTGGTAC TACGGCGTCT CCGAGCGGCA GTTCCGCCGG GCCTACGAGG AGGCCATCCG CCAGCCGGGG GTCTCCGGCG AGAACCTGCT GCGGCTCATG GAGCTGAGGA TGGACAACGT CGTGTACCGG ATGGGCTTCG CCACCAGCCG CCCGCAGGCG CGGCAGCTGG TGGTGCACGG GCACTTCCTG CTCAACGGCC GCAAGCACAA CATCCCCTCG GCGACCCTCA AGCCGGGCGA TGTGATCACG GTGCGCGACA AGAGCCGGCG GCTGCAGCCG ATACAGGAGG CCGTGGAGCA GGTCGTGGCC GTCCCGGCCT GGCTGGAGGC CGACCACGAG AACTTCACCG GCCGGGTGCT GCACACCCCC AGCCGGGACG AGATCGACGC TCCCGTCGAG GAGCAGCTGA TCATCGAGTT CTACAGCCGC TAA
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Protein sequence | MARYTGPRGR RDRRAGVMLS SMRKNPLEKK PYPPGEHGRD RQRQTEYGLR LMEKQKARWY YGVSERQFRR AYEEAIRQPG VSGENLLRLM ELRMDNVVYR MGFATSRPQA RQLVVHGHFL LNGRKHNIPS ATLKPGDVIT VRDKSRRLQP IQEAVEQVVA VPAWLEADHE NFTGRVLHTP SRDEIDAPVE EQLIIEFYSR
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