Gene Rxyl_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1999 
Symbol 
ID4117587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2020219 
End bp2021049 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content73% 
IMG OID638036786 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_644758 
Protein GI108804821 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGTGCTA ATGTCCTCTG CGGCATGGCA GCGCAGGAAG GGCCCGGGGT CTTCTGGCCG 
GTGAACTTCG CCCACCGGGG CGCGTCGGCG CGCGCCCCGG AGAACACGCT GGAGGCCTTC
CGCCTCGGGG TGGAGGCGGG GGCCGGGGGG CTCGAGATGG ACCTCCACAT GACGCGCGAC
GGCGAGATCG TGGTGATCCA CGACCACACC GTGGACCGGA CCACCGACGG CTCCGGCGCG
GTGCGCGAGA TGAGCCTGCG GGAGCTGCGG CGGCTGGACG CGGGCTACCG CTTCAGCCCC
GACGGCGGGA GGAGCCACCC GTACCGCGGC CGGGGGCTGA GGGTGCCGAC GCTGCGCGAG
GTCTACGAGG CCTTCCCCCG CGCGGCGGTG AACATGGAGA TAAAGGAGCC CGTGCCGGGG
ATAGAGAGGC GGGTCCTGGA GGTGATAGAC GGGGCGGGGG CGCGGGGGAG GACGCTGGTC
GCCGCCTTCG ACCACGGGAT AGTGCGGCGC TTCCGGGAGG CGTCGGGCGG GGAGGTGGCC
ACCTCGGCCT CCCGGCTGGA GGTCGTGGCC TTCTACGCGC TCGTCCGGCT GGGGCTCTGG
CGGTTTGCCC GCCCGGGCTA CGCCGCGCTA CAGATCCCGG TCCGCCGGCG CGGCATAGAG
CTCATCACCC CCTCCCTCGT CGCCGCGGCC CACGCCCTCG GCGTCAGGGT GGACGCGTGG
ACGATAAACG AGCCGGAGGA GATGCGCCGG CTGCTGGGGC TCGGGGTCGA CGTGGTGATG
ACCGACCGCC CGGAGGAGCT GGAGAAGGTG CTGCGGGCGG GGCGGGTGTA G
 
Protein sequence
MCANVLCGMA AQEGPGVFWP VNFAHRGASA RAPENTLEAF RLGVEAGAGG LEMDLHMTRD 
GEIVVIHDHT VDRTTDGSGA VREMSLRELR RLDAGYRFSP DGGRSHPYRG RGLRVPTLRE
VYEAFPRAAV NMEIKEPVPG IERRVLEVID GAGARGRTLV AAFDHGIVRR FREASGGEVA
TSASRLEVVA FYALVRLGLW RFARPGYAAL QIPVRRRGIE LITPSLVAAA HALGVRVDAW
TINEPEEMRR LLGLGVDVVM TDRPEELEKV LRAGRV