Gene Rxyl_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1928 
Symbol 
ID4115544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1948079 
End bp1948870 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content75% 
IMG OID638036714 
Producthypothetical protein 
Protein accessionYP_644687 
Protein GI108804750 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.101794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGC CCGGATCCTT CGTGCGGCGG GTGCTCGTCG TTCTCGACGC CTCCCCCCAG 
AACCCCGCGG TGCTCGAGAG CGCGGCGGAG CTCGCCGCCC GCCTGCGCAG CGAGCTTCTG
GCCATGTTCG TGGAGGACGC CAATTTGCTG CGGCTCGCCG AGCTGCCGTT TCTGAGGGCC
GTGGACCCGT TCTCGGGAGC GGCGAGGGAG CTGAACGGGA TGACCATGGA GCGGGGGATG
CGGGCCTACG CGCGCCGGGC GCAGGAGACG CTGCGGCAGG TGGCCGCGGG CCGGAGGGTT
CGCTGGTCGT TCAGGACGGT GCAGGGGACG GGGATCTCGA GCGTCGTCTC CGCGGCCTCC
GGGACGGACC TGATCGTGCT GAGCAGCCCG GCGGGGCTCG CCGACGCGGA GGTGCGGCAG
ACGCTCGCGG AGCGCGGCGG CGCGGTCCTC GTGCTGGGCG GCCGCCTGCG CCCGGGCGGC
ACCGTCGTGG CCGTGTGGTC CGGCGACCCC GAGTCCGGCC GGGCCCTGGA GGCCGCCGCC
TACCTGGCGG GCTCCTGGCG GGCGCCGCTC GTGCTGCTGG TGCCTCCGGA GAGGTCCGGA
GGCAGCGCGC CGGAGTTGCC GGGGCTCCCC GGAGCCGCTT CGCGCACGCT GCAGCGCTTC
GACGAGCCTT GCCTCTCGAG CGCCCTCAGG GAGGTGGGGG ACACGGGGCT TCTGGTCCTG
CCCTTCAGCG CCGGCATGAA GCTGCGCGGG CTCCTCGAGG AGGCGCGCTG GCCGGTGCTG
CTCGTAGCCT AA
 
Protein sequence
MAEPGSFVRR VLVVLDASPQ NPAVLESAAE LAARLRSELL AMFVEDANLL RLAELPFLRA 
VDPFSGAARE LNGMTMERGM RAYARRAQET LRQVAAGRRV RWSFRTVQGT GISSVVSAAS
GTDLIVLSSP AGLADAEVRQ TLAERGGAVL VLGGRLRPGG TVVAVWSGDP ESGRALEAAA
YLAGSWRAPL VLLVPPERSG GSAPELPGLP GAASRTLQRF DEPCLSSALR EVGDTGLLVL
PFSAGMKLRG LLEEARWPVL LVA