Gene Rxyl_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1892 
Symbol 
ID4115570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp1916064 
End bp1916528 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content59% 
IMG OID638036680 
ProductRbsD or FucU transport 
Protein accessionYP_644654 
Protein GI108804717 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1869] ABC-type ribose transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGAA GCGGCATCTT GAACCAACCA CTAAGCAATA TACTGGCCTC GTTCGGACAC 
ACCGACCTCT TGGTGGTCTG CGACGCCGGA TTCCCGATCC CAAGGGACGC CCAGCGCGTG 
GATCTCGCGA TCGCTCCTGA CCTGCCCGAC CTCAGGACCG TGTTGAGCCT CATAAACGAG 
GAGTTCATCA CCGAGAAGGT GGTGATCGCG GAAGAGATGG CCGAGTTCAA TCCTCCGTTG 
CACGGGTGGC TGCAGAAGCA CTTCTCCGGC GTCGAGTTCG AGCGGAGACC TCACGAGGAG 
ATGCTTACTC AGGTTGCCAC GTCTGCCAAA GCCATCGTGC GTACCGGCGC GTTCGATCCT 
TGGGGCAACA TCGGACTCGT CTCCGGCGTA GACGTCGAAC GCTTTTTCGC CAAAGAAGGC 
ACCGTTCTAC CCGACTACTA CCGCGACAGG GCAGGTGAGG CGTAA
 
Protein sequence
MKRSGILNQP LSNILASFGH TDLLVVCDAG FPIPRDAQRV DLAIAPDLPD LRTVLSLINE 
EFITEKVVIA EEMAEFNPPL HGWLQKHFSG VEFERRPHEE MLTQVATSAK AIVRTGAFDP 
WGNIGLVSGV DVERFFAKEG TVLPDYYRDR AGEA