Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1876 |
Symbol | |
ID | 4115554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1903165 |
End bp | 1903911 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638036664 |
Product | GntR family transcriptional regulator |
Protein accession | YP_644638 |
Protein GI | 108804701 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.600058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACGTA ACAGTTCGAA ATCACATCAC CTGCGGCTAC TCAATGAGAT GGCATATCAG AAAGAAGATC AGAGGTCATT CAGCACACCG CCGACCTCTC AAGAGGCGGT ACTGCGCGAG ATTCGCCAAG CGATAATGAC CCGTCGGCTG AAGCCGGGGC AGTGGGTGCG CCAACTGGAT CTCGCGAAGC GTTTGAACGT CAGCGCGGTG CCAGTTAGGG AGGCGTTAAG GACCCTGGAG GCCGAGGGAC AGGTTGTGTA CGAGCGCCAC CGTGGATACA AGGTGGTCGA GCTCTCAAGA GAGCAGATCG AAGAAATCTA CCTCGCGAGG CGTCTCCTCG AAGATGAGTT GACGCGCCGA GCGGTGGCGA AGGCCGACGC GGAACTCATC CGGTGTCTCG AACGGACGAT CGTCCGGATG AACAAGCTTA TGGAGGCAGG CGATGTTCTG GGGTACACTG AGGCTAACCG GGAGTTTCAT TTCTTGCTCT TTGAGCAGGC CGGACTACCG AAGATCTGCC GCATGGTAGA TATCCTCTGG CAAAACTCCG AGGTTTATCG CGGTTTGATT TTCGGTCCTG TCTGGCACAA GCAGGTCCAG AAGGACCATC GGGCTATCTT CGAGGCCTGC AAGTCTGGGG ACGTCGCCGG AGCCATTGCC GCTCAGGAAG TGCACAGGTC CAACGCCTTG GCGAAGATCA TCGCATTGCT TGAGGAAACG GAAGCCACCA GGAAAGGAGA GGTATAG
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Protein sequence | MRRNSSKSHH LRLLNEMAYQ KEDQRSFSTP PTSQEAVLRE IRQAIMTRRL KPGQWVRQLD LAKRLNVSAV PVREALRTLE AEGQVVYERH RGYKVVELSR EQIEEIYLAR RLLEDELTRR AVAKADAELI RCLERTIVRM NKLMEAGDVL GYTEANREFH FLLFEQAGLP KICRMVDILW QNSEVYRGLI FGPVWHKQVQ KDHRAIFEAC KSGDVAGAIA AQEVHRSNAL AKIIALLEET EATRKGEV
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