Gene Rxyl_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1876 
Symbol 
ID4115554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1903165 
End bp1903911 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content57% 
IMG OID638036664 
ProductGntR family transcriptional regulator 
Protein accessionYP_644638 
Protein GI108804701 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.600058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGTA ACAGTTCGAA ATCACATCAC CTGCGGCTAC TCAATGAGAT GGCATATCAG 
AAAGAAGATC AGAGGTCATT CAGCACACCG CCGACCTCTC AAGAGGCGGT ACTGCGCGAG
ATTCGCCAAG CGATAATGAC CCGTCGGCTG AAGCCGGGGC AGTGGGTGCG CCAACTGGAT
CTCGCGAAGC GTTTGAACGT CAGCGCGGTG CCAGTTAGGG AGGCGTTAAG GACCCTGGAG
GCCGAGGGAC AGGTTGTGTA CGAGCGCCAC CGTGGATACA AGGTGGTCGA GCTCTCAAGA
GAGCAGATCG AAGAAATCTA CCTCGCGAGG CGTCTCCTCG AAGATGAGTT GACGCGCCGA
GCGGTGGCGA AGGCCGACGC GGAACTCATC CGGTGTCTCG AACGGACGAT CGTCCGGATG
AACAAGCTTA TGGAGGCAGG CGATGTTCTG GGGTACACTG AGGCTAACCG GGAGTTTCAT
TTCTTGCTCT TTGAGCAGGC CGGACTACCG AAGATCTGCC GCATGGTAGA TATCCTCTGG
CAAAACTCCG AGGTTTATCG CGGTTTGATT TTCGGTCCTG TCTGGCACAA GCAGGTCCAG
AAGGACCATC GGGCTATCTT CGAGGCCTGC AAGTCTGGGG ACGTCGCCGG AGCCATTGCC
GCTCAGGAAG TGCACAGGTC CAACGCCTTG GCGAAGATCA TCGCATTGCT TGAGGAAACG
GAAGCCACCA GGAAAGGAGA GGTATAG
 
Protein sequence
MRRNSSKSHH LRLLNEMAYQ KEDQRSFSTP PTSQEAVLRE IRQAIMTRRL KPGQWVRQLD 
LAKRLNVSAV PVREALRTLE AEGQVVYERH RGYKVVELSR EQIEEIYLAR RLLEDELTRR
AVAKADAELI RCLERTIVRM NKLMEAGDVL GYTEANREFH FLLFEQAGLP KICRMVDILW
QNSEVYRGLI FGPVWHKQVQ KDHRAIFEAC KSGDVAGAIA AQEVHRSNAL AKIIALLEET
EATRKGEV