| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1863 |
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| Symbol | |
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| ID | 4117416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1888536 |
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| End bp | 1889903 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638036652 |
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| Product | major facilitator transporter |
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| Protein accession | YP_644626 |
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| Protein GI | 108804689 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.565866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCCG TATCTGACGG GCAGAGTTGG AAAACAATGA ATCCTCGAGC AAAGCACGCT
ATTCGGGGCG CTTTCTTAGC CTACTTCGTA GATATGTTCG ACATCTACCT ACCTATCGTG
GTCCTGGCAC CTGTCTTGAC CTATTTCGTG GCGCCGGATC TGGGCGCCAC GGCGACCGCG
ATCGTTGGGG CCTCGATCTT TGCGGTGACG CTGATCGGAC GGCCTTTGGG GGCAGGGATA
TTCGGGCACT TCGCGGATAC GATCGGGCGC AAACGCACGG CCATGATCTC CATCACGGGC
TTTGGCGTGG CGACCCTGCT AATGGCCTTG CTACCCGGCT ACCAACAATG GGGCATAGCA
GCCGTGATTC TCTTCATCGC CTTGCGCTTC GTCGACGGCA TATTTCTTGG TGGAGAGTAC
ACTGCGGCGA ACCCGCTGGC TATGGAGTAT TCTCCCAAGG AGAAGCGGGG CCTCTACAGC
GCGGTGATCA ACTGCGCTTT CCCGCTGGCC TACGCTTCCA TCGCGCTGAT CACCCTGCTC
TTGCTCTTCT TGATGCCCTC TGAAAAGCTC GATGCTCCCT ACGTGCAGTG GGGATGGAGG
ATCCCCTTCT TCATTGGGGC TGCCCTAGCC TTCGCGTTCG CGATCTATTA TTACCACGCT
GTCAGCGAGT CGGAGCTCTG GCAAGGCTCT GAGCACACAG AAGCGCCCAT CAAGCAGCTA
TTCAGAGGCG AGAATTTGAG GAGCTTCTTG CAGGTATTTG TGCTGATGAG CGGGCTCTGT
CTCGCGTTGC AAACAGTAGC AGCCATTTTG CCCGGTGTGC TTGGCGGTCC GGTAGGGTTC
TCTAGCACGA ACGTCACTGT CACGCTGGTC GTCGCCTACC TCGTGCTAAT CCCTGCGAAT
ATCGTAGCCG GGCTGATCAG CCAACGGATA GGACGCCGCA CTTTCCTGAT CGCCATGGGC
GCTATTATAG CGATTGTGGC CACTCTATTG TACTATCTGC TTATAAGTAA TGCGTCAGAG
AGTTACTTCG GAGTCGTCCT ACTGACTGTA GCTATCGTGG CTTTGGTGGA TTCTCCCTTC
GCCCTCACGC CCGCTTACAT AAACGAACGC TTCCACATTG GCGTCCGAGC TTCAGGATAC
GGTCTCGGCT ACAGCCTCGC GGTAATCCTT CCTTCTTTCT ACGCATTTTA TCAGGCGGGC
TTGGCGACAT TCATGCCCTT TGAGTACACA GTGCTCGTTC TCGTAGTGGT AGGTGGCCTC
CTGATCGCCA TCGGGGCGGC GTGGGGCCCA GAAACCAAGG ACGTCGATTT TTCGGCAGAT
GCGAAGGCAA CAACTGAGGA GCGAGCACAC GAAGACGAGA GTCTTTGA
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| Protein sequence | MTAVSDGQSW KTMNPRAKHA IRGAFLAYFV DMFDIYLPIV VLAPVLTYFV APDLGATATA
IVGASIFAVT LIGRPLGAGI FGHFADTIGR KRTAMISITG FGVATLLMAL LPGYQQWGIA
AVILFIALRF VDGIFLGGEY TAANPLAMEY SPKEKRGLYS AVINCAFPLA YASIALITLL
LLFLMPSEKL DAPYVQWGWR IPFFIGAALA FAFAIYYYHA VSESELWQGS EHTEAPIKQL
FRGENLRSFL QVFVLMSGLC LALQTVAAIL PGVLGGPVGF SSTNVTVTLV VAYLVLIPAN
IVAGLISQRI GRRTFLIAMG AIIAIVATLL YYLLISNASE SYFGVVLLTV AIVALVDSPF
ALTPAYINER FHIGVRASGY GLGYSLAVIL PSFYAFYQAG LATFMPFEYT VLVLVVVGGL
LIAIGAAWGP ETKDVDFSAD AKATTEERAH EDESL
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