Gene Rxyl_1850 details

Gene Information

• Locus tag: Rxyl_1850
• ID: 4117407
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: -
• Start bp: 1874433
• End bp: 1876376
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 638036643
• Product: hydantoinase/oxoprolinase
• Protein accession: YP_644617
• Protein GI: 108804680
• COG category: [E] Amino acid transport and metabolism; [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGCCGGC GATACACGGT AGACATAGAC ATAGGCGGCA CCCTGACCGA CGGCTTGTTT 
AGCGATGGCA AGCGGATGTG GATGGCAAAG GTGGACACCA CGCCGCATGA TTTCACTGTT 
TGTTTCTTTG AGTGTTTGCG TGAGGGTGCT GGTCTCACCG GGCACGTGGA CCTTTCCTCC 
TTTCTTGGGG AGGTCGCCGT CATCCGCTGG TCAAGTACCA TCGCAACCAA CGTGCTCGCT 
GAAAAGAAGG GGCCCCGTCT CGGGCTGTTA GTGAGCCCGG GGCATGAGGA CGACCTCTAT 
GGAGAGGGAA AAAGCTCGGC TATTGGGCAC CTCGTCATAC CGGAGAATAT CACTACGGTG 
AAAGACCCTG AAAATACCGA GGAGGTTCTT GCTGCGATCC GGGCGCTCCT GGAGCGTGGC 
GTGAGGCGCA TCTGCGTCAG CCTAGAAGGT TCCTTTGAGC AAGCCGAGGG TGAGAGAACT 
ATCAAGCGGC TCGTCGAGAA GCAGTTCCCA GACCACTACT TGGGAGCAGT ACCTACGGTC 
TTGGGGAGCG AGATCTGTCG CCACCCCGAC GATATGACGC GCACCCACAT GAGCCTCATT 
AACTCGTACG TCCACACGCC GCTCGCGATG GCCCTGTTTA AGGCCGAAGA CGAGCTGCTC 
TCCCAGTACA ACTACCGCCG TCCCGTCTAC ATCGGCCACG TCAACGGCGG CGTCGCGCGC 
GTCTCCAAGA CCAAGGGCGT GGACACCACC GAGTCCGGGC CGGTCTTCGG ACTGGTCGCT 
AGCGCCTACT TCGCTCGCCG CTACGGATTG GACAGGGTAA TCTCGCTCGA CGTTGGCGGG 
ACGACGTCCA AGATAGGCGT CGTGGTTAAC GGAGAACCAG TGATGTCCAG GGAGACCGAG 
TTTTTCGGGA TACCTTTGAA GATGCCCTGG ATTCTCTTGC GCTCCGTATC CCTCGGGGGC 
GGCAGTGTTG CCCGGGCCAA GGACGGGAAG GTCGCCCTCG GTCCGGACAG CATGGGCGCT 
TACCCCGGCC CCGCCTGCTA TGACCTTGGC GGCAAGAATG CCACACTGAC GGACTCTTTT 
CTCATCAGTG GGATGCTCAA CCCGCAGCGT TTCCTTGGAG GCAGACGTCA CCTGAGCGAG 
GAGCGTGCTA GGGAGGTTCT GCAAGAACAC CTCGCAGGAC CGCTCGGCGT CAGCGTCGAG 
GAGGCGGCGA GGCGGGTGAT CGAGGAGGCC AACCGCATCG TCGAGGAGAC TATCGACCGC 
ACCCTGGAGG AGGCTGGGTA TACAAGGGAG GGATTCACCC TCTTCTGTTT CGGTGGGAAC 
GGCGCGAACT TCGCTGCCTC GGTGGCAGAC CGCATGGGTT TGAGAGAAGC CTATATCTTC 
GAAATCGGAC CAGTGCTTTC TGCCTTCGGG TCATCCGTGT CTGATATCTC ACACGTCTAC 
GAGGAGTACC CATTCCTCAA GGTTTCCGAT GGGACCGAAA AAGAGGTCTG GAGCATCATC 
GAGAAAGGGC GCGGGCGGGT GCTGCGCGAC CTCGAAGGCG AAGGCCTGAT CACTGCGGAT 
GCCACCTTGA TTGCCGAGGT GACGGTCACC AACGGTAGGA CGCGCACCCT AGAATTTGCT 
CTTGAACCCG AGAAGGCGAG GGCCGCACTC TCGGAGGCAA GTAGCGGGAT AATAGAGCGC 
GTCGCGGTTC GGGGCGTTTC TCCCGTCCCG CGCGTCGAGC TCAGGGAAGA GCCCAGCCGA 
CCGTACGACG CCGAACCGGG GGACAGCAGG AGGGTTCTCG GTAAGGAGGC CGGGGTGTAC 
GACTGGAACG ACCTCTCGCC AGGGGCTACG GTCATCGGCC CGGCGATGCT CGAGTCAGAG 
ACGAACACCT GTCACATCGC CGACGGATGG AAGCTCCGGA TAGATAGTTT CGGGAACGCC 
GTTCTGAGAA AGGGAGAAGA ATAA 

 

Protein sequence

MGRRYTVDID IGGTLTDGLF SDGKRMWMAK VDTTPHDFTV CFFECLREGA GLTGHVDLSS 
FLGEVAVIRW SSTIATNVLA EKKGPRLGLL VSPGHEDDLY GEGKSSAIGH LVIPENITTV 
KDPENTEEVL AAIRALLERG VRRICVSLEG SFEQAEGERT IKRLVEKQFP DHYLGAVPTV 
LGSEICRHPD DMTRTHMSLI NSYVHTPLAM ALFKAEDELL SQYNYRRPVY IGHVNGGVAR 
VSKTKGVDTT ESGPVFGLVA SAYFARRYGL DRVISLDVGG TTSKIGVVVN GEPVMSRETE 
FFGIPLKMPW ILLRSVSLGG GSVARAKDGK VALGPDSMGA YPGPACYDLG GKNATLTDSF 
LISGMLNPQR FLGGRRHLSE ERAREVLQEH LAGPLGVSVE EAARRVIEEA NRIVEETIDR 
TLEEAGYTRE GFTLFCFGGN GANFAASVAD RMGLREAYIF EIGPVLSAFG SSVSDISHVY 
EEYPFLKVSD GTEKEVWSII EKGRGRVLRD LEGEGLITAD ATLIAEVTVT NGRTRTLEFA 
LEPEKARAAL SEASSGIIER VAVRGVSPVP RVELREEPSR PYDAEPGDSR RVLGKEAGVY 
DWNDLSPGAT VIGPAMLESE TNTCHIADGW KLRIDSFGNA VLRKGEE