| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1836 |
|---|
| Symbol | |
|---|
| ID | 4117472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1858549 |
|---|
| End bp | 1859874 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638036630 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_644604 |
|---|
| Protein GI | 108804667 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATATG CCCAAGACGG CTATCCGGTG GAACAGGCCT CCAAGATAGG GCACCTCAAG
CTGGTCGGGA ACGAGTTGAT CAGGAGGGTG ATCCAAGACT TCGAGGACGT CTCTCCGAGT
TCGGACGGAC CAAAGGTGAG CAAGACCGGG AGCGTGGATC TCTCGGTCGA TAGCGGCATC
CGACGCGTAA TCACCGTGGA CGGTGGGCAG GTGGTGGTCC CGAATCCCGC GCGGCGGGAG
AAGGCCATGG CCTTCGTGCA GGTGGCGGCG TGCCTGCTGC GCATGGATGA CCTGCGCTAT
ATGAGGGAAC ATCCCCTCAT GGACCCCAGG GACGTAAAAA AGATGATAGA GGGGGCGGTC
TGGTACAACC CCGCCGCGAT ACCCTTGGCG GGAATCCACC ATCCTGGCCT CACCGTGCAG
GAGACCATCC GCCGCATCGT CGACAGGACT CTCTCCGAGA CCGGGCTCTA CGAGACCCTG
AAGTTCCTGG TCTACCGCGG ATGGGAGGCC GAGTGGGGCG TGCCGGAGGA GGAGCGGCCG
CACATGTCCT GCGTGGGCTG CGACGAGGAG ATCTACCTGC CCCGATGGCA GCTCCGCTTC
GATTGCCCCG CTTGCGGAGC CAGGCACACG CTCTCCGACT ACCTCTCCAT AGGCACGCAA
GGTCCCGATG ACTGGAGCAG GGAGGAAGCG GCCAGCGCGC TACGCGATGC GCTGGAGACC
CTGAGCTTGA TGCACTTCCT CCGCGTCTAC CGCGATGACC GGGAGGTCCT CGGGGAGACC
CTGTTTATCA AGGATGGCCC GCTTCTGTTA CGCGCCGCCC TCTCGCGGCT CGTCGTCCCC
ATCAGGGACT TCATCGCATA CCTTCGAACG GAGGGGCGCC CCCCCAACCT AGTCGGGGTC
GAGAAGACCG GCGACTTCGC CGGGTTCTTG GATGAATACA GGCATGCCCT GGAGGAGCCC
GGCGACTACT TCTTGCCTTC GGTGCGTTTC GTGGTCGAGG AGGTAACCGG GGCGGTGATG
ACGGAGGGAT ACCGCAATCG CGTCTCCTAC GGCGCCAAGG TGGGCGTGCG CATCGGTCCC
GATCACCTGC TCGCCCTCAA CGTACCCACC GGTCCCTTCC TCACGGAGCC CGAGCCCAAA
GACCTGATCG GCTTCGAGGC CTCCATCCGC AGCCTCTCCG AGCTCGTGAG CTACAGGTAT
CCCAACGCGC TGATACCGCT CGTATTGGCG AACTCCGCGG CCTCGATCGC CCGCAGGCCT
TCCGGAGACA TCCTCTCCGC GTTCGCCGAC AGCCTCATGC GTACGACCAC AACACCGAGA
CCATGA
|
|---|
| Protein sequence | MAYAQDGYPV EQASKIGHLK LVGNELIRRV IQDFEDVSPS SDGPKVSKTG SVDLSVDSGI
RRVITVDGGQ VVVPNPARRE KAMAFVQVAA CLLRMDDLRY MREHPLMDPR DVKKMIEGAV
WYNPAAIPLA GIHHPGLTVQ ETIRRIVDRT LSETGLYETL KFLVYRGWEA EWGVPEEERP
HMSCVGCDEE IYLPRWQLRF DCPACGARHT LSDYLSIGTQ GPDDWSREEA ASALRDALET
LSLMHFLRVY RDDREVLGET LFIKDGPLLL RAALSRLVVP IRDFIAYLRT EGRPPNLVGV
EKTGDFAGFL DEYRHALEEP GDYFLPSVRF VVEEVTGAVM TEGYRNRVSY GAKVGVRIGP
DHLLALNVPT GPFLTEPEPK DLIGFEASIR SLSELVSYRY PNALIPLVLA NSAASIARRP
SGDILSAFAD SLMRTTTTPR P
|
|---|
| |