Gene Rxyl_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1796 
Symbol 
ID4117338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1821185 
End bp1821451 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content67% 
IMG OID638036593 
Productmultiple resistance and pH regulation protein F 
Protein accessionYP_644567 
Protein GI108804630 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2212] Multisubunit Na+/H+ antiporter, MnhF subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.673053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCACGAGA TAGTCTTCTA CCTCGCCTTC GCCTGGATGA CCGTCCTGCT CGTCGTGAGC 
GTGGCGGCCG TGGTCCGGCC GCGCTCGACG GCGAGCAGGA TCCTGGCGCT CGACATGCTG
ACCCTGATAC TCGTGGCCCT GCTGGTGCTC TACTCCGCCG CGAATCGCTC CCCCTACTAC
ATGGACGCGG CGCTCGTCCT CGCCCTCCTG GCGTTCGTCT CCACCCTGGT CCTCGCCCGC
TACCACGGCG AGAGGAGGGT GTTCTAG
 
Protein sequence
MHEIVFYLAF AWMTVLLVVS VAAVVRPRST ASRILALDML TLILVALLVL YSAANRSPYY 
MDAALVLALL AFVSTLVLAR YHGERRVF