| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1739 |
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| Symbol | |
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| ID | 4116639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1768858 |
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| End bp | 1770480 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638036537 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_644511 |
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| Protein GI | 108804574 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase
[TIGR01226] phenylalanine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0504276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGAGA CCCTGCCTGC GACCGGCTAC GGGCTAGAGC TGGACGGGCG CTCGCTGGGT
CTTGAGGACG TGGTCGCGGT GGCCCGGGGG GAGGCCGGCG AGTGCGTCCT ATCCGGCGCG
GCGGCGGAGA GGGTAGAGGA GGCGAACCGT CTGAAGCGGG AGCTCATCGC CTCCGAGCGT
CCCATCTACG GGGTGACCAC CGGCTTCGGG GACAGCGCGC ACCGCCAGAT CTCGCCCGCC
AGGACGGCCG AGCTGCAGAA GAACATCCTG CGCTTTCTGG GCAACGGGAT CGGGCCGCTG
GCCCCGCCCG AGGTCGTGCG GGCCACCATG CTGCTCCGGG CCAACTGCAT GGCCCGGGGC
AATTCCGGGG TGCGCCGGGA GCTGGTGGAG CTGCTGCTGG CGTTCGTCAA CCACGACGTG
CTGCCGCCCA TCCCCGAGCG TGGTTCCTGC GGGGCGAGCG GGGATCTCGT CCCGCTCTCC
TATCTGGGCT CCGCGCTCAC CGGGCACGGC GAGGTGCTCC ACCGCGGGGA GTGGCGGCCG
GTGGGGGAGG TGCTCGAGGA GCTCGGGCTC GCGCCGCTCG AGCTGGAGGC CAAGGAGGGG
CTCGCCATAA CCAACGGCAC CTCCTTCATG AGCGCCTTCG CCGCGCTCGC CGTGTGGGAC
GCCGGGGAGC TGGCCTTCGT GTGCGACCTG TGCACGGCCA TGGCCTCCGA GGCGCTGCTC
GGCAACCGGG CGCACTTCCA CCCCTTCATC CACGAGAACA AGCCGCACCC CGGGCAGGTG
GAGAGCGCGC GCGTCATCCG CGGGCTGCTC GAGGGCTCCG GGCTCTCCAC CGAGATAGAC
CAGGTGCTCT CCGGGGACGG CCTCGGGGGG AGGGGCTACC GGGAGCTGGA GCGCAACATC
CAGGACAAGT ACTCCATACG CTGCGCGCCG CACGTGAACG GTGTGCTCCG GGACACCCTC
GGCTGGGTCC GGCGGTGGGT GGAGGTCGAG ATGAACTCCT CCGACGACAA CCCCCTCTTC
GACGCGGAGG GGCGCGCCGT CCACAGCGGG GGCAACTTCT ACGGCGGGCA CATCGTGCAG
GCCATGGACT CCCTGAAGGT CGCGCTCGCC AGCGTCGCCG ACCTTATGGA CCGGCAGCTG
GAGCTCGTGG TAGACGAGAA GTTCAACAAC GGGCTCACCC CCAACCTCAT CCCGTTCTTC
GACCCCGAGG GGCCGCAGGC GGGGCTGCAC CACGGCTTCA AGGGGATGCA GCTCGCCTGC
TCCTCGCTGG TGGCCGAGGC CTGCAAGCTG TCCAGCCCGG TGAGCGTCCA CTCCCGCTCC
ACAGAGGCGC ACAACCAGGA CAAGGTCAGC ATGGGGACCA TCGCGGCGCG CGACGCCAGG
ACCATCGTGG AGCTCGCGCA GAACGTGGCG GCCATCCACC TCATCGCCGT CTGCCAGGCG
CTGGATCTGA GGGGCACGCA GAGCATGGCG CCGAGGACGC GGGAGGCCCA CCGGCTGGTG
CGCGAGCGGG TGCCCTTCCT CGACGCGGAC CGGCGGATGG AGGAGGACAT CCGCCGGGTG
GTGGAGATGA TCAAAGCCCG GGAGCTCTCC CGGGCGCTGG GGTACCAGGA TGCCTCTGCC
TGA
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| Protein sequence | MRETLPATGY GLELDGRSLG LEDVVAVARG EAGECVLSGA AAERVEEANR LKRELIASER
PIYGVTTGFG DSAHRQISPA RTAELQKNIL RFLGNGIGPL APPEVVRATM LLRANCMARG
NSGVRRELVE LLLAFVNHDV LPPIPERGSC GASGDLVPLS YLGSALTGHG EVLHRGEWRP
VGEVLEELGL APLELEAKEG LAITNGTSFM SAFAALAVWD AGELAFVCDL CTAMASEALL
GNRAHFHPFI HENKPHPGQV ESARVIRGLL EGSGLSTEID QVLSGDGLGG RGYRELERNI
QDKYSIRCAP HVNGVLRDTL GWVRRWVEVE MNSSDDNPLF DAEGRAVHSG GNFYGGHIVQ
AMDSLKVALA SVADLMDRQL ELVVDEKFNN GLTPNLIPFF DPEGPQAGLH HGFKGMQLAC
SSLVAEACKL SSPVSVHSRS TEAHNQDKVS MGTIAARDAR TIVELAQNVA AIHLIAVCQA
LDLRGTQSMA PRTREAHRLV RERVPFLDAD RRMEEDIRRV VEMIKARELS RALGYQDASA
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