| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1693 |
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| Symbol | |
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| ID | 4116651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1715815 |
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| End bp | 1717089 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638036491 |
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| Product | homoaconitate hydratase family protein |
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| Protein accession | YP_644465 |
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| Protein GI | 108804528 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.27842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCACA CGCTCGCTGA GAAGCTGCTG ATCTCGCATT CCGAGGTTGA TGACGCCTCT
CCCGGCGACA TCATTATGGT TCGCTGCGAC TTGGTCATGG CGAACGATGT ATCTGGACCA
GTTGCCTTTC GCCAGATGGA GAGGATGGGT GTCCAGAGGG TTTTCGACCC CAGTAAGGTG
GTAATGGTCT CGGATCACTT TATGCCGGCC AAGGACGCCA GAAGCGCCGC GCTGCAGAAG
CGCCTCAAGA GCTGGTCTGA CTTACAGGGC GTCTACTACT ATGGCCAGGG AAGAGGCGGG
ATCGAGCATA CCGTGCTCGT AGAGGACGGA TGGATCGTTC CCGGGATGGT GATCGCCGGC
GGAGACTCCC ACACATGTAC GTATGGAGCT CTAGGGGCGT TTGGAACGGG GCTCGGTTCT
ACAGACATTG CCGCATGCCT CGCATTCGGG GAGTTCTGGC AACAGGTCCC GGGAACCATC
CAGGTCGAGT TCACGGGCCA TAAAGGCTCT TTTGTCGCGG GCAAGGATTT GATCTTGGCC
GTGATCGCGG ATATCGGTGT CGGCGGAGGC GCCAATGCTG TTCTAGAGTT TGTCGGCGAG
GGTGCAGCCT CTCTCTCTTT GGACGACAGG CTTGCCGTTG CTAATATGGC CGTCGAGGCA
GGGGCGGAGA CCGGGATCTT CCCGGCCGAC GAGGTGACTG CCAGGTACCT CGACCGGCGG
GCGGATAGGG AGTGGCATCC TGAAAGGTCC GATCCCGACG CCAGTTACGT ACGCAAGGTC
AAGATCGACC TAAACTCCCT GGAGCCCCTC GTTGCTCTGC CGCATTCACC GGGTAACGTG
GTCGCTGTGT CCGAGGCCAG GGGAACCAAG ATCGACCAGG TCTATATTGG CAACTGCTCT
AACGGTACTA TAACCGACCT TCGGCAGACC GCCGAGATCC TGAGAGGCAA CAGGGTTCAC
CCCGACGTAC GGGCGATCAT CGTGCCAGCC AGCCAGAAGG TTTACCGGCA GGCTATATCC
GAGGGGTTGA TCGATGTCTT TGTAGAAGCT GGCGCCGTAG TTTCGACCCC GACGTGCGGC
GCGTGTTTCG GCGGGCATAT GGGCGTCTTG GCCGAAGGCG AGCGTGCTAT CACGACCACG
AATCGCAATT TCAAGGGCCG TATGGGATCA CCTCTGGCCG AGGTTTGTTT GGCGAACGCT
TATGTTGCTG CGGCCGCTGC GGTCGCCGGG GAGATAGTAG AGCCCGCCAG TATCTGTTCG
GAGCCGGTGA GATGA
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| Protein sequence | MPHTLAEKLL ISHSEVDDAS PGDIIMVRCD LVMANDVSGP VAFRQMERMG VQRVFDPSKV
VMVSDHFMPA KDARSAALQK RLKSWSDLQG VYYYGQGRGG IEHTVLVEDG WIVPGMVIAG
GDSHTCTYGA LGAFGTGLGS TDIAACLAFG EFWQQVPGTI QVEFTGHKGS FVAGKDLILA
VIADIGVGGG ANAVLEFVGE GAASLSLDDR LAVANMAVEA GAETGIFPAD EVTARYLDRR
ADREWHPERS DPDASYVRKV KIDLNSLEPL VALPHSPGNV VAVSEARGTK IDQVYIGNCS
NGTITDLRQT AEILRGNRVH PDVRAIIVPA SQKVYRQAIS EGLIDVFVEA GAVVSTPTCG
ACFGGHMGVL AEGERAITTT NRNFKGRMGS PLAEVCLANA YVAAAAAVAG EIVEPASICS
EPVR
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