| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1324 |
|---|
| Symbol | ruvB |
|---|
| ID | 4115991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 1350881 |
|---|
| End bp | 1351948 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638036118 |
|---|
| Product | Holliday junction DNA helicase RuvB |
|---|
| Protein accession | YP_644100 |
|---|
| Protein GI | 108804163 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
|---|
| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.211473 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGAGA TGGACGACTT CACCGTGCGC CGCGGGGAGC GCGAGGACAT AACCGGAGCT
GCCGGGCCGC CCGAGGAGCG GCCGCTCGAC CCGGCGGCCT TCGAGGAGGA CGACGAGCCC
ACGCTGAGGC CGCGGACTCT GGACGAGTTT GTGGGGCAGG AGCGGCTGAA GGAGAACCTC
AGGATCTTCG TGGAGGCCGC CAAGCAGCGC GGGGAGCCGC TCGACCACAT GCTGCTCGCC
GGGCCTCCCG GGCTGGGGAA GACCAGCTTG TGCCGCATCC TCGCCGCCGA GATGGGGGTG
CAGCTGCACC CGACCAGCGG CCCCAGCCTC GAGCGGGCCG GGGACATGGC CGCGATCCTC
ACCTCGCTCG AGGAGGGGGA CTTCCTGTTC ATAGACGAGA TACACCGCCT CAACAGGCAG
ATAGAGGAGG TCCTCTACCC GGCGATGGAG GACTTCGCCA TAGACATCGT GCTCGGGCAG
GGCCCTTCGG CGCGCACCAT CCGGATGGAC CTGCCGCGCT TCACCCTCGT GGGGGCCACC
ACCCGCACCG GGCTGATGAC CAAGCCGCTC CTGGACCGGT TCGGGTTCTC GGCGCGCCTG
GACTACTACG AGCCGCACGA GCTGGAGAAG ATCGTGGTGC GCAACGCGAG GATCCTGGGC
GTTCCCATCA CGGAGGGCGG GGCCCGCCAG CTCGCCCGCC GCAGCCGCGG CACCCCGCGG
GTCGCGAACC GGCTGCTCAA GCGGGTGAGG GACTACGCCC AGGTGGTGGG CGACGGGACG
ATAGACGAGG AGACGGCGAA CGCCGCCCTG GAGATGCAGG GGGTGGACCA CCTCGGGCTG
GACCGGACCG ACCGGGAGTA CCTCAGCCTC ATCATCGAGA AGTTCGACGG GGGGCCGGTG
GGGGTCGGCA CGCTCTCCGT GGCGCTCGGG GAGGCGCGGG ACACCGTCGA GGACGTCTAC
GAGCCCTACC TGCTGCAGAG CGGGCTCATA CAGCGCACGA GCAGGGGCCG GGTGGCCACC
CGGCACGCCT ACGCCCACCT GGGCTTCCCG GTGCGGGACG GCGGCTAG
|
|---|
| Protein sequence | MEEMDDFTVR RGEREDITGA AGPPEERPLD PAAFEEDDEP TLRPRTLDEF VGQERLKENL
RIFVEAAKQR GEPLDHMLLA GPPGLGKTSL CRILAAEMGV QLHPTSGPSL ERAGDMAAIL
TSLEEGDFLF IDEIHRLNRQ IEEVLYPAME DFAIDIVLGQ GPSARTIRMD LPRFTLVGAT
TRTGLMTKPL LDRFGFSARL DYYEPHELEK IVVRNARILG VPITEGGARQ LARRSRGTPR
VANRLLKRVR DYAQVVGDGT IDEETANAAL EMQGVDHLGL DRTDREYLSL IIEKFDGGPV
GVGTLSVALG EARDTVEDVY EPYLLQSGLI QRTSRGRVAT RHAYAHLGFP VRDGG
|
|---|
| |