| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1323 |
|---|
| Symbol | |
|---|
| ID | 4115990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 1350290 |
|---|
| End bp | 1350880 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638036117 |
|---|
| Product | Holliday junction DNA helicase subunit RuvA |
|---|
| Protein accession | YP_644099 |
|---|
| Protein GI | 108804162 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
|---|
| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0418911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGACA GGCTTCGCGG ACAGCTGGTA GAGAAGGACC CCGAGGGGGT GGTCGTGGAT
TGCGGGGGCG TCGGGTACCG CGCCGCCGCC CCGCTCTCCA CGCTCAGGGC GCTGCCCGCC
GTGGGGGAGG AGTGCGTGGT GCACACCCGG ATGGTGGTGC GCGAGGACGC CATGCTCCTC
TTCGGGTTCG CCACCCGGGA GGAGCGGGAG GCCTTCGACG CCCTCACCTC CGTCAGCAAG
GTCGGGCCGC GGCTCGCGCT CGCGGTGCTC TCGGCGATGA CGCCGGGGCA GATGATGGAG
GCGGCGGCGC GGGGGGACGT GCACAGGTTC GCCGCGGTGC CCGGGCTCGG GCGGAAGACC
GCCGAGCGGC TGGTGCTCGA GCTCAGGGGA CGAGAGCTCG CGGCGGCCGG TGGCGGGGGC
GGCGTCGCGG CCGGCGAGGG GGACGGGCCC TTCATGGAGG CCCGCGAGGC CCTCACCGGG
CTGGGGTACT CCCTGGAGGA GGCCGAGAGG GCGCTCCGGG ACGTGCCGCC GCAGGAGACC
GTCGAGCAGT ACATCAAGGC TGCGCTCAGG AAGATAGGGG GCAGGCGCTA G
|
|---|
| Protein sequence | MIDRLRGQLV EKDPEGVVVD CGGVGYRAAA PLSTLRALPA VGEECVVHTR MVVREDAMLL
FGFATREERE AFDALTSVSK VGPRLALAVL SAMTPGQMME AAARGDVHRF AAVPGLGRKT
AERLVLELRG RELAAAGGGG GVAAGEGDGP FMEAREALTG LGYSLEEAER ALRDVPPQET
VEQYIKAALR KIGGRR
|
|---|
| |