Gene Rxyl_1258 details

Gene Information

• Locus tag: Rxyl_1258
• ID: 4116416
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 1279099
• End bp: 1279641
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 638036046
• Product: IS630 family transposase
• Protein accession: YP_644034
• Protein GI: 108804097

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.379007
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGAGTTA CAGTAAGGTC CATGAAATCT CCAATCTTTG TACGTTCGTT GTCGGAAAAC 
GAGCGCGAAG ACCTCGAAGC CGGGCTGCGC TCCAAAGACG CCTTCGTAAT GCGCCGATCA 
CAGATACTTC TTGCCAGCTC CAGGGGTGAG AAAGCTCCGA AGATCGCCGA GAATCTCGGC 
TGCGGGACGC AGACGGTGCG CGACGCCATC CACGACTTCA ACGAGAGGGG TCCCGACGCT 
CTCGTTGCCA GATCCTCGCG CCCCAAGAGA ACCCGCGACG CCTTCGACGA GGAGAGTGCC 
GAGCGGCTTC GGGGGATGCT CCACCGCTCT CCGAGGGAGT TCGGTCGCGA GTCGAGCCTG 
TGGACTTTGG AGATGGCCGC GGAGGTCGCT TTCGAGGAGG GGCTCACACA AAGGCGGGTC 
TCGGGGGAGA CGATCCGGGC CACTTTGGCG CGCCTTCTCG GAGTGAGATG GCAGCGAGCC 
AAACGCTGGA TCACATCTCC CGACCCCTTG TACGAAAGAA AAAAAGAAGG CGCGACCTGC 
TGA 

 

Protein sequence

MRVTVRSMKS PIFVRSLSEN EREDLEAGLR SKDAFVMRRS QILLASSRGE KAPKIAENLG 
CGTQTVRDAI HDFNERGPDA LVARSSRPKR TRDAFDEESA ERLRGMLHRS PREFGRESSL 
WTLEMAAEVA FEEGLTQRRV SGETIRATLA RLLGVRWQRA KRWITSPDPL YERKKEGATC