| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1252 |
|---|
| Symbol | |
|---|
| ID | 4116410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1275008 |
|---|
| End bp | 1275478 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638036040 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_644028 |
|---|
| Protein GI | 108804091 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.476616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGACC CTCACGCCAA CCTCGAGAGG CTGGGATACG AGCTGCCCGA CGTCCCCTCC
CCCGCCGGCT CCTACGTCCC GGCCGTGCGG AGCAACGGCA TGATCTTCAC CGCCGGACAG
GTGCCCTTCC GGGACGGCAA GCTGGCCTTC TCCGGCAAGG TCGGAGGGGC GGTTAGCCTG
GAGGAGGCGC AGGAGGCGGC GAGGATCTGC GCGCTGAACG CGCTGGCCGC GGCGGCCGCG
GAGGCGGGCG GCCTGCAGAA CATCGCCCGC ATCGTGAAGG TGGTGGGGTT CGTGGCCTCC
GCCCCGGGTT TCAACCAGCA GCCGCAGGTG CTGAACGGGG CTTCGGACCT GCTCGGTGAG
ATCTTCGGCG AGGCCGGGCT GCACGCCCGC TCGGCGATCG GGGTGGCGGA GCTGCCGCTG
GACGCGCCGG TGGAGGTGGA GCTGGTGGCG GAGGTCCGCC GGCCCTCTTA A
|
|---|
| Protein sequence | MQDPHANLER LGYELPDVPS PAGSYVPAVR SNGMIFTAGQ VPFRDGKLAF SGKVGGAVSL
EEAQEAARIC ALNALAAAAA EAGGLQNIAR IVKVVGFVAS APGFNQQPQV LNGASDLLGE
IFGEAGLHAR SAIGVAELPL DAPVEVELVA EVRRPS
|
|---|
| |