Gene Rxyl_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1186 
Symbol 
ID4116831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1212181 
End bp1212669 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content75% 
IMG OID638035976 
Producthemerythrin HHE cation binding region 
Protein accessionYP_643964 
Protein GI108804027 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.926204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAGGC ATCCGGCGAT GAGGGAGTTC TCGGACGACC ACCACCAGGG GCTGGTGCGG 
GCCCGGCGGC TCAGGAGGGC CGCCGCGGGG GAGGGCGAGG AGCCGGTGGA GGCCGCGCGG 
GCCTTCGTGC GCTTTTTCCG GGAGGAGACG GAGGAGCACT TCGAGAAGGA GGAGCGGGTT 
CTGTTGCCGG TGGCGGAGGC GTCCGGCGTG TCGCCGCGGG AGCCGGACAT CCGGCGCATG 
CTCGCCGAGC ACGCGGAGCT CAGGCGGCTC GTCCGGCGGC TCGAGGAGGA GGCTGACGCC 
GGGAACGTGC GCCCGGAGAC CCTGAGGGAG GCCGGAGGGC TGCTCGAGGG CCACATCCGG 
CTCGAGGAGC GGCGGGTCTT CCCGATGCTC GAGCTCGAGC TCCCCGAGCG GGCGCTCGAC 
GAGCTCGGCC GCCGGGTGGC GGAGTTCGGC CGGAGCGGCG GGGCTCAGGG CGGGGGCTCG 
AACCCGTAG
 
Protein sequence
MRRHPAMREF SDDHHQGLVR ARRLRRAAAG EGEEPVEAAR AFVRFFREET EEHFEKEERV 
LLPVAEASGV SPREPDIRRM LAEHAELRRL VRRLEEEADA GNVRPETLRE AGGLLEGHIR 
LEERRVFPML ELELPERALD ELGRRVAEFG RSGGAQGGGS NP