Gene Rxyl_1177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1177 
Symbol 
ID4116822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1203019 
End bp1203858 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content71% 
IMG OID638035967 
Productiron permease FTR1 
Protein accessionYP_643955 
Protein GI108804018 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0672] High-affinity Fe2+/Pb2+ permease 
TIGRFAM ID[TIGR00145] FTR1 family protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0971353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGGCTT CGTTTCTCGT GATCCTGCGC GAGGGGTTTG AGGCGACGCT CCTGGTAGCG 
ATCCTGCTGG CGTATCTGGC CCAGATCGGC CGCCCGAAGG ACGCCCGGGC GGTGTGGTAC
GGCGTGGGGG CGGCGGCGGC GCTCTCGGTG CTGGCGGGCG CGGTGCTCTT CGCCACCGCC
TCCGGGCTCG GGGGGAAGGC CGGGCTCGTC TTCAAGGGGG CCACCATGTG GCTCGCGGTC
GGGTTTCTGA CGTACATGAT CCTGTGGATG CGGCGGCAGT CGAAGACCGT GGCCCGGGAT
CTCAGGCGCG GGGTGGACGC GGCGCTGGAG CGGGGCAGCC TCTTCGCGCT GGCCTCCCTG
AGCTTCGTGA TGGTCTTCCG GGAGGGGCTG GAGACCGCGC TCTTCATGTT CGGCATCACC
CAGACCTCCA CCCCGCTCGC GGTGGCCGCC GGGGGCGCGC TCGGGCTCGC CGGGGCGATC
GTGCTGGGCT ACCTCGTCTA CGCCGGCGGC AAGCGGATAA ACATCGGGGC GTTCTTCAAG
GTAACCGGGG CGCTCCTGCT CGTGGTCGCC GCCGGGCTGC TCGCCCACGG GGTGGCGATG
TTCGAGATGG CGGGGCTCTT CCCGGCGATC CTCTATCCCC TGTGGGACCT CACCGGCGTC
TCCGTCCTCA CCACCGAGAG CACCGTCGGC CAGTTCCTCT CCGCCTTTCT GGGGTGGGAC
CCCAAGCCCG ACCTCATAGA GTTCGGGGCC TGGGCGCTCT ACGTGGCGAT CGTAGGCTAC
CTCTTCCTGC GCCCGGAGGG GCCTGCCCCG CAGGCCAGGG CGGCGCGGGC GGACGGCTAG
 
Protein sequence
MLASFLVILR EGFEATLLVA ILLAYLAQIG RPKDARAVWY GVGAAAALSV LAGAVLFATA 
SGLGGKAGLV FKGATMWLAV GFLTYMILWM RRQSKTVARD LRRGVDAALE RGSLFALASL
SFVMVFREGL ETALFMFGIT QTSTPLAVAA GGALGLAGAI VLGYLVYAGG KRINIGAFFK
VTGALLLVVA AGLLAHGVAM FEMAGLFPAI LYPLWDLTGV SVLTTESTVG QFLSAFLGWD
PKPDLIEFGA WALYVAIVGY LFLRPEGPAP QARAARADG