| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1160 |
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| Symbol | |
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| ID | 4116844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1187243 |
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| End bp | 1187866 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638035950 |
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| Product | prepilin-type cleavage/methylation-like protein |
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| Protein accession | YP_643938 |
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| Protein GI | 108804001 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGCCC TGCGAAAAGC AAACCTGAGC GGCGGGGAGG AGGGCTTCAC CCTCGTGGAG
ATGATGGTCA CCATCGTCAT CATGCTCGCC GTATTCTTCG CCCTTCACGC CATCTTCGAC
ATGAGCTTCC GGGTCTTCAG CTTCAGCAAC AACAAGGTGG AGGCCGTCGA GAACGCGCGG
GTCGGGATGG AGAGGATGAT CCGCGAGATC CGCGCCGCCT ACCCATACGC CAAACCCTGT
AACCCGCCCG ACGAGCGGCT GTTTGCCGTC ATGGGCGAAA CCCAGATCGC CTTCGGCAAC
GACCTGGACG GAGACCGCAA GGTGGACCTG CCCGTTTCAG AAGGAGGATG CGACGACCCG
GAGCCCGAAG ACGAAGAGAT CACCTACTTT CTCAACGACA AAAAGCTCAT GCGCCAGAAA
GGGGACGAGA GCGCTCAGCC CGTGGCGGAG AACGTGGCAG ATCTGCGCAT CGAGTACCTG
AAGCGCAGCG GCGACGGCCT CGTCGCGGCC ACCGCCGAGA GCGAGGTGGA GGTGGTCCGG
GTGAAGCTGG AGGTGCGCGT GGGCCGCGGC GCCGGGCGTG GAACCCAGAC GCTTGCCGCC
GAGACGGAGC TGAGGAACCG GTGA
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| Protein sequence | MKALRKANLS GGEEGFTLVE MMVTIVIMLA VFFALHAIFD MSFRVFSFSN NKVEAVENAR
VGMERMIREI RAAYPYAKPC NPPDERLFAV MGETQIAFGN DLDGDRKVDL PVSEGGCDDP
EPEDEEITYF LNDKKLMRQK GDESAQPVAE NVADLRIEYL KRSGDGLVAA TAESEVEVVR
VKLEVRVGRG AGRGTQTLAA ETELRNR
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