| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1000 |
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| Symbol | |
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| ID | 4116218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1036612 |
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| End bp | 1038135 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638035785 |
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| Product | phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase |
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| Protein accession | YP_643778 |
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| Protein GI | 108803841 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
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| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCGGA GGGCTGTGAT CTCTGTTTCC GACAAGAGCG GGGTGGCGGG GTTCGCCCGT
CGCCTGCGAG ATCTCGGCTT CGAGATAATC TCCACCGGCG GGACGGCGCG GGCGCTGCGG
GAGGCCGGAA TCCCGGTCGT CCCCGTCTCC GAGGTCACCG GGGAGCCGGA GATCCTGGGC
GGCCGGGTGA AGACGCTGCA CCCCAGGATC CACGGCGGCA TCCTGGCCGA CCGCGAGAGG
GAGGAGCACC TCCGCCAGCT GGAGGAGCGC GGCATAGACC CCCTGGACCT GGTGTGCATC
GACCTCTACC CCTTCGAGCG CGCCGTCGCC GGAGGAGCGG GCGAGGAGGA GGCCATCGAG
CAGATAGACA TCGGCGGCCC CGCCATGCTG CGGGCCGCCG CCAAGAACTT CCGCTCGGTG
GTCGTGGTCC CGGGGCCGGA GTTCTACGGG GAGGTGCTCT CGGGGCTGGA GTCCGGCGGG
GTGCCGGAGG AGACCCGAAG GCGTCTCGCG GCCGCCGCCT TCAGGCGCAC GGCGCTCTAC
GATGCCGCCA TCGCGCGCTG GATGGCCGGG GAGGGGGAGC TCCCCGAGGC GCTCGTGCGG
GGCTACAGGC GAAAGATCCC GCTGCGCTAC GGCGAGAACC CCCACCAGAG GGCCGCCTAC
TACGCCGAGG AGGGGGCGCC CGCACACCTG CTCTCCGGGG CCAGGCGCTT GCAGGGAAAG
CAGCTCTCCT TCAACAACCT CTACGACGTG GACGCCGCGC GCTCGCTGCT CGCCACCCTC
GGCGAGGAGC CGGCGGCCGT CATCGTGAAG CACGCCAACC CGTGCGGCGC CGCGGTGGGC
AAAAGCGCGG GCGAGGCCTA CCTGAAGGCG CTCGACTCCG ACAGGATCTC GGCCTTCGGG
GGCATCGTGG CCCTCAACCG CGAGGTGGAC GGGGAGCTGG CGCGCGAGAT CTCGGGCGTC
TTCACCGAGG TCCTCGTCGC CCCGGGCTTC GCCGCGGAGG CGCGGGAGGT CTTCGCGGAG
AGGGAGGCCA TGATCCTTCT GGAGGCCGGG CCGCTGGAGC CCCCGAGCCT CTCCGCCAAG
TACGTGACGG GCGGGATGCT CCTGCAGGAG ACGGATGCGG TGGCCGGGGA GGACGCTTCC
TCCTACAAGA CGGTCGCCGG CGAGCCCCCC TCCGGGGAGG CGCTGCGAAA CCTCCTCCTC
GCCTGGCGCG TCGCCGCCCG GGTCAAGAGC AACGCCATCG TCCTCGTGCG GGACGGCGCC
ACGGTGGGGA TAGGGGCCGG GCAGATGAGC CGGGTGGACG CGGCGCGCAT AGCCGTGGAG
AAGGCCGGCG GGCGGAGCCG CGGCGCGGTC GCCGCGAGCG ACGCCTTCTT CCCGTTCGCC
GACGGGGTGG AGGCGCTGGC CGACGCGGGG GTCTCGGCGG TCATCCAGCC CGGGGGCTCC
AGGCGGGACG CCGAGGTCAT AGCGGCGGCC GAGCGGCGGG GAATGACCAT GGTCTTCACC
GGCAGGAGGC ACTTCCTCCA CTGA
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| Protein sequence | MRRRAVISVS DKSGVAGFAR RLRDLGFEII STGGTARALR EAGIPVVPVS EVTGEPEILG
GRVKTLHPRI HGGILADRER EEHLRQLEER GIDPLDLVCI DLYPFERAVA GGAGEEEAIE
QIDIGGPAML RAAAKNFRSV VVVPGPEFYG EVLSGLESGG VPEETRRRLA AAAFRRTALY
DAAIARWMAG EGELPEALVR GYRRKIPLRY GENPHQRAAY YAEEGAPAHL LSGARRLQGK
QLSFNNLYDV DAARSLLATL GEEPAAVIVK HANPCGAAVG KSAGEAYLKA LDSDRISAFG
GIVALNREVD GELAREISGV FTEVLVAPGF AAEAREVFAE REAMILLEAG PLEPPSLSAK
YVTGGMLLQE TDAVAGEDAS SYKTVAGEPP SGEALRNLLL AWRVAARVKS NAIVLVRDGA
TVGIGAGQMS RVDAARIAVE KAGGRSRGAV AASDAFFPFA DGVEALADAG VSAVIQPGGS
RRDAEVIAAA ERRGMTMVFT GRRHFLH
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