Gene Rxyl_0628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0628 
Symbol 
ID4116922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp659066 
End bp660394 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content68% 
IMG OID638035413 
Producthypothetical protein 
Protein accessionYP_643410 
Protein GI108803473 
COG category[S] Function unknown 
COG ID[COG3876] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGAGGG AGATGAACCG CAAGGACTTC CTCAGGCTCG GCGCAGGGAC GGCCGCCGGC 
ATCGCCGGCG CCTCCTTGCT CGGCGCCCGC GCCGCCGGCG CGAGGCCCGG CAAAGGTCGT
CGGGTCAGGC CGGGGATAGA GGTGCTGCTG GAGGAGCGCC CCGGCATGCT GCGGGGGAAG
AAGGTTGGGA TCATCACCAA CCCCACCGGC GTGCTGCCGG ACCTGACGCA CGTCGTTGAC
GCGCTGGCGG CCAAGACGAA CCTCGTCGCC ATCTTCGCGC CGGAGCACGG GTTCAGGGGC
TCAGAACAGG CCGGGGAAGG GGAAGGGGAC TACCTCGACC CCAGGACCAA AACCCCGGTC
TACGACATCT ACGGCAAGGA CAGGGAGGAG ATCGCGGCCA CCTTCGAGCG GGCGGGGGTG
GAGACGGTCC TCTTCGACAT CCAGGATGTG GGCGCCCGCT TCTACACCTA CATCTGGACC
ATGTCCGACA GCATGGAAGC CTCGGCCATC GGCGGGAAGG AGATCATCGT CCTCGATAGG
CCGAACCCCA TCACCGGCCT CGAGACGCAG GGACCGGTGC TCCGTCCCGA GTACAGCACC
TTCGTCGGGC GCTACCCCAT CGCCCAGCGC CACGGCATGA CCGTCGCCGA GCTCGCGAGG
ATGTTCAACG CCGCGTTCGT CCCCGAACGC ACGGACGGCA AACGGGCCAA CCTCGCCTTC
GTCGAGATGG AGGGCTGGTC CCGCGAGATG TACTACGAGG ACACGGGGTT GCCCTGGGTC
ATGCCCTCGC CCAACATGCC CACCGTGGAC ACCGCCGTCG TCTACCCCGG CACCTGCATG
TTCGAGGGCA CCAACCTCTC CGAAGGCCGC GGCACCACCC GTCCCTTCGA GCTGCTCGGC
GCGCCGCACA TAGATTGGAA GCTCTCCGAC GCCGTGAGGG CGCTAGACTT GCCGGGCACG
ATGTTCCGCG AGGCGTACTT CGCCCCCACC TTCGGCAAGC ACCAGGGCAA GACCGTCGGC
GGCGTGCAGG TCTACGTGAC GGACCGGTAC GAGCACGACC CCATCCGGAC GGCGCTCGCG
ATCATGCTCG AAGCCAAGAG GCTCTACCCC GACGACTTCG CGTGGCGCTA CGACGCCTGG
GATCCGGCCC GTCCGTACTG GATCGACAAG CTCACCGGCT CGGACTACGT CCGCACCTCG
GTGGACGCCG GCAAGAGCCC GGACGAAATA GTCGCCGGCT GGCAGGACGA GCTCGACGCT
TTCCGCAGGA TGCGGCAGAA GTACCTGCTC TACAGAGCCA GGCCCGTCCC TCCGGGGCCG
AGAGGTTGA
 
Protein sequence
MEREMNRKDF LRLGAGTAAG IAGASLLGAR AAGARPGKGR RVRPGIEVLL EERPGMLRGK 
KVGIITNPTG VLPDLTHVVD ALAAKTNLVA IFAPEHGFRG SEQAGEGEGD YLDPRTKTPV
YDIYGKDREE IAATFERAGV ETVLFDIQDV GARFYTYIWT MSDSMEASAI GGKEIIVLDR
PNPITGLETQ GPVLRPEYST FVGRYPIAQR HGMTVAELAR MFNAAFVPER TDGKRANLAF
VEMEGWSREM YYEDTGLPWV MPSPNMPTVD TAVVYPGTCM FEGTNLSEGR GTTRPFELLG
APHIDWKLSD AVRALDLPGT MFREAYFAPT FGKHQGKTVG GVQVYVTDRY EHDPIRTALA
IMLEAKRLYP DDFAWRYDAW DPARPYWIDK LTGSDYVRTS VDAGKSPDEI VAGWQDELDA
FRRMRQKYLL YRARPVPPGP RG