| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0617 |
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| Symbol | |
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| ID | 4116387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 645375 |
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| End bp | 646808 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638035403 |
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| Product | major facilitator transporter |
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| Protein accession | YP_643400 |
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| Protein GI | 108803463 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGGCGC GGGGGCTCCG GGCCGGCCTC GAGTACAAGT GGGGGGCGCT CTCGTGCACC
AGCATCGGGG CGCTCCTCGC CTCCATAAAC GGCGGTTCGC TCATCGTCGC CCTGCCGACG
CTGCTGCGGG AGCTGCACAC CGGGCTCTTC AGCCTGGTCT GGGTGCTGCT CAGCTACCTG
CTCGCCCAGA CCGCGCTCAC CCTCACCGCC GGCCGGATCG CCGACGTGGT CGGCCGCAAG
CGGCTCTACG TCGGGGGGTT CGCGCTCTTC ACGGCCGTCA GCCTGCTGGC CGGGTTCGTC
GGCGGCGCCG GGCAGCTCAT CGCCGCCCGG ACGCTCATGG GGGCCGCCGG GGCGTTCATG
ATGGCCACCT CCAGCGTCAT CGTCACCGAC GCCTTCCCCT CCCGCGAGCT GGGGCGGGCG
CTCGGGATAA ACATGATGAT GGCCGCGGCC GGCTCCACCC TCGGGGTCGT GGTCGGCGGG
GTGATGACCT CCATCTCCTG GCGCTGGGTC TTCTGGTTCA ACGTCCCGCT GGGGGTGGTG
GGGACCGCGT GGGCCGCGGC CAACCTGCGG GAGGTGGTGG AGCTCGAGAA GGGGCGGCGG
CTGGACGTGG CCGGCAACCT GGCCTTTCTC GGCGGGCTCG CCGGGCTGCT CGTCGCGCTC
ACCCTCGGGG GCATCCGCGG CTGGGGCAGC CCGCTGGTGG CGGCCGGGTT CGGGGCGGCG
GCGCTCCTGT TCCCCCTCTT CCTCCTCGTC GAGGCGCGGG CGAAGGACCC CATGGTCCGG
CTCTCCACCT TCAGGAGCCG CACCTTCGCC TTCGGGAACC TGAGCGCCTT TCTCAACTCC
GTGGCCCGGT TCGCCGTCAT GTTCATGTTC GTGTTCTTCT TTATCGGGGT GAGGGGCTAC
GACCACCTCA TGGCCGGGCT CCTGCTCGTA CCGCTGGCCG GGGTCATGTT CGTCGCGGCC
CCCGTCTCCG GGTGGCTGGC CGACCGGGGC GAGGCCCGCG TGATAAGCAC CGCCGGCATG
CTCGTGACCG CCGCCGGGCT TCTGGGCATG GGGACGCTGG TGGGGGCCGG GACGCCCTAC
CGGGAGATAG CGCTGCTCAT GGCCGTGGTG GGGGCGGGCA GCGGGATCTT CAACTCCCCC
AACACCCGCT CCATCATGAG CTCCGTGGGG CCCGGGGAGC GCGGGGTGGC CAGCGGCACC
CGCACCCTCC TCACCAACGT CGGCGGGGTG CTCTCCATAG CCCTGGCCAT CTCCATCGTG
GCCGGCGCGA TCCCGCAGCG GGAGATGTTC GAGATCTTCT CCGGCACCAC CGGGCACCCC
CTCTCCCCGG AGGAGGCCGG GCCCTTCGTC TCCGGCTTCC ACCGGGCGCT CCTGGTGGGG
GCCGCGGCCA GCCTTCTGGG GGCGCTCTTC TCGGCGCTGC GCGGCAGGAC CTGA
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| Protein sequence | MKARGLRAGL EYKWGALSCT SIGALLASIN GGSLIVALPT LLRELHTGLF SLVWVLLSYL
LAQTALTLTA GRIADVVGRK RLYVGGFALF TAVSLLAGFV GGAGQLIAAR TLMGAAGAFM
MATSSVIVTD AFPSRELGRA LGINMMMAAA GSTLGVVVGG VMTSISWRWV FWFNVPLGVV
GTAWAAANLR EVVELEKGRR LDVAGNLAFL GGLAGLLVAL TLGGIRGWGS PLVAAGFGAA
ALLFPLFLLV EARAKDPMVR LSTFRSRTFA FGNLSAFLNS VARFAVMFMF VFFFIGVRGY
DHLMAGLLLV PLAGVMFVAA PVSGWLADRG EARVISTAGM LVTAAGLLGM GTLVGAGTPY
REIALLMAVV GAGSGIFNSP NTRSIMSSVG PGERGVASGT RTLLTNVGGV LSIALAISIV
AGAIPQREMF EIFSGTTGHP LSPEEAGPFV SGFHRALLVG AAASLLGALF SALRGRT
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