Gene Rxyl_0597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0597 
Symbol 
ID4116562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp626512 
End bp626940 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content74% 
IMG OID638035383 
Producthypothetical protein 
Protein accessionYP_643380 
Protein GI108803443 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.662069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGGA GGGTGGAGCT CTCCCCCATC GGGTACGTCC GGACCCGCCC CGGGCGGGTG 
CCGCGCAGCT GGACCACCTC CGGGGTGGAG GGGGTGCTCG AGGTGCTCCC CGAGTACGCG
GAGGGGCTGC GCGACCTCCG GGAGGGGGAG AGGATCCTGG TGGTCTTCCA CTTCCACCAG
AGCCCGCCCT TCGGGCCGGA GCACCTGCGG CAGACCCCGC CGCACCGGGA GGGGCCGGTC
GGGGTCTTCA GCACCTGCTC CCCCCTCCGC CCCAACCCGG TGGGCGTCTC GGTGCTGGAG
GTGCTCGGGG TGGAGGGGAG ATGCGTGCGG GTGAGGGGGC TGGACATGCT GGACGGCACG
CCGGTCCTGG ACATCAAGCC GCACGTCGCC GCCGACCCCT CCCACCCCTG CCGGCGGGAG
AGGGCGTGA
 
Protein sequence
MSGRVELSPI GYVRTRPGRV PRSWTTSGVE GVLEVLPEYA EGLRDLREGE RILVVFHFHQ 
SPPFGPEHLR QTPPHREGPV GVFSTCSPLR PNPVGVSVLE VLGVEGRCVR VRGLDMLDGT
PVLDIKPHVA ADPSHPCRRE RA