| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0578 |
|---|
| Symbol | |
|---|
| ID | 4116544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 608239 |
|---|
| End bp | 608946 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638035364 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_643362 |
|---|
| Protein GI | 108803425 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0139749 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCCCG CCCCCGCGAG CCTCGCCCTG CTCCAGCGGC TGGAGCCCAG GATCATGGAC
TGGGCCTGGG TGCGCGAGAA CTTCGCCGAG GACATCCTGC CGGCGCTCGT CGGGCACATC
TACCTCTCCG GCGTCTCGCT GGCCATAGCG CTTGCCGTCT CGCTGCCCAC CGGGGTGCTC
GTGGCCCGCT ACCGCAAGGC CTACCCGCCG GTGGTGTTTC TGGCCGGGCT GCTGTTCACC
ATCCCCAGCC TCGCCCTCTT CGCCATCCTG GTCACCATCC CCGGCGTGGG GATAGGCCCC
AACGCGGTCA TCATCGCGCT GGTGGCCTAC TCCATCCTCG TCCTGGTGCG GAACACCGTC
GCCGGGCTGG ACTCCGTCCC GCCCGAGACC ATCGACGCCG CCCGCGGCAT GGGGCTCACC
CCCCGCCAGA TCCTCTTCAA GGTGGAGCTG CCGCTGGCGC TGCCGGTCAT CGTGGCGGGC
GTGAGGATCG CCACCGTGAC GGTCATAGGG ATCGCCACCA TCGGCGCCTA CATCGCGGGC
GGGGGCTTGG GGCAGCTCAT CTTCGACGGG ATAGACCGGC TGTTTCCGAC CATGATCATC
GCGGGGGCGG CGCTGGCCAC GGCGCTGGCC GTGGCCGCCG ACGTGGTGTT GTCAAGCTTG
GAACGCTACC TGAGACCATG GGCACAACGT GGCAAGAGGG CGGCTTAA
|
|---|
| Protein sequence | MEPAPASLAL LQRLEPRIMD WAWVRENFAE DILPALVGHI YLSGVSLAIA LAVSLPTGVL
VARYRKAYPP VVFLAGLLFT IPSLALFAIL VTIPGVGIGP NAVIIALVAY SILVLVRNTV
AGLDSVPPET IDAARGMGLT PRQILFKVEL PLALPVIVAG VRIATVTVIG IATIGAYIAG
GGLGQLIFDG IDRLFPTMII AGAALATALA VAADVVLSSL ERYLRPWAQR GKRAA
|
|---|
| |