| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0568 |
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| Symbol | |
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| ID | 4116749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 597300 |
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| End bp | 598247 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638035356 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_643354 |
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| Protein GI | 108803417 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.973707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGCG CCTTGGTCAC TGGGGCCTCC GGTTTCGCCG GTGGATACCT GGTTCGTTAC
CTTCTCGAGC TTGGCTACGA AGTGGTGGGG GCTGTCCATG GTGCGGGTGC TCGCTTGCCG
GATGGATGCC ATCGGGCCGT TCTGGATATA ACCGACCGGC AAAGCTTGCG GGAAGTGGTC
GCGGCGACGC AGCCCGATGA AATCTACCAC TTGGCGGGTA TTGCCCGTCC AGCAAACGAT
TCGGTAGATG AATTCTACGA GGTCAACTTC GGTGGAACAT TGAAACTCCT GGAGACCGTG
CGGGAGCATG CTCCTGATGC GGCGGTCTTG CTGGTCGGTA GTGCTTACGC CTACGGCAGC
GTGGGGCATC CCATCTCCGA AATCGAGCTC TTCAAGCCGG TCAACCACTA TGGTTCCTCC
AAGGCTTCGG CGGATTTGCT GGGGCACGTC TACTCCCTCG AAGGGTTGCG GGTAGTAAGA
GCTAGGCCGT TCAACCACTC TGGTCCGGGC CAGAGCCCGG CGTTCGTGTT GCCGACCCTC
GTAGAGCAGT TCGTGGAGAT CGAGGCCGGA AAGCGGGAAC CGGTGATCCG TCTCGGCAAT
CTGGATTCGG TTAGAGACTT CAGCGACGTG CGGGATATCG TGCGTGGATA CCGCTTGGCG
CTGCTGAAAG GGCGGAGCGG CGAACCATAC AACCTGGGGA GCGGGAGAGG GACCTCGGTG
CGGGAGTTGT TCGAGATGGT CCGAGAGAAG GCGGAGCAGG AGGTGGAGTT GCAGGTCGAG
CCATCCAGAA CCCGGATCAT AGATATACCT TATCTGGTTG CGGACACAAG CAAGGCTCGC
GAAGAGCTCG GTTGGGAACC AGAGGTGTCC TTGGAGCAGA CCCTGCATGA CATGCTCGAC
GCTGTTCGCA AGCGGTTGGT GGCCGAAGAT GGAGTATGCG GCACATGA
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| Protein sequence | MPRALVTGAS GFAGGYLVRY LLELGYEVVG AVHGAGARLP DGCHRAVLDI TDRQSLREVV
AATQPDEIYH LAGIARPAND SVDEFYEVNF GGTLKLLETV REHAPDAAVL LVGSAYAYGS
VGHPISEIEL FKPVNHYGSS KASADLLGHV YSLEGLRVVR ARPFNHSGPG QSPAFVLPTL
VEQFVEIEAG KREPVIRLGN LDSVRDFSDV RDIVRGYRLA LLKGRSGEPY NLGSGRGTSV
RELFEMVREK AEQEVELQVE PSRTRIIDIP YLVADTSKAR EELGWEPEVS LEQTLHDMLD
AVRKRLVAED GVCGT
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