| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0551 |
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| Symbol | |
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| ID | 4116167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 580146 |
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| End bp | 580925 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638035339 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_643337 |
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| Protein GI | 108803400 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0259011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGACC TTGCCGGAAA GAGGGCGCTG GTGACCGGCG CGGGGATGGG CATCGGGCAG
GCCATAGCGG TGGAGCTGGC CCGCTGCGGG GCCGACGTGG CCGTCCACTA CGCCCACACG
CCACCGGACG AGACGGTGGG GGAGGTGGAG CGGGCGGGCC GCAGGGCCCA CCCGGTGCGG
GGGGACCTGA GCCGGGTGCC GGAGTGCGAG CGGGTGGTAG AGGAGGCCGC AGAGGCCCTC
GGAGGGCTCG ACGTGCTGGT GAACAACGCC GGCATAACCC GGGCGCTGGA CTTTCTGGAC
ACCGACGAGG AGACCTACGA CGCCATCTTC GACCTCAACA TGAAGGGCTA CTTCTTCTGC
GCCCGCAGCG CCGTCCCGCA CATGCTCGAG GCGGGCGGCG GCAGCATCGT CAACATAACC
TCGGTCCACG GCTTCGCCGG CTTCCCCCAC CACACCGCCT ACGCCGCGAC GAAGGGCGCC
ATCATCGCCT TCACCCGCCA GCTGGCCATA GAGCTGGCGG GGAGGGGGAT CCGGGTGAAC
GCCATCGGCC CCGGGCTCAT CGAGGTGCCC CGCTACTACG ACATCCCCGG CTACTCCCCA
GAGCAGGGCA GGGAGCTGGT CCCCTGGGGC CGCGTGGGCA AACCCAAAGA CGTCGGGCCC
GCAGCGGCCT TCCTGGCCTC CGACGCCGCC GACTTCATAA CCGGACAGGT GCTCTACGTG
GACGGCGGCA CCACCGCCCG CATGGGCCTC TGGTGGGAGC AGGGCGAGCA GCCCCAGTAG
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| Protein sequence | MYDLAGKRAL VTGAGMGIGQ AIAVELARCG ADVAVHYAHT PPDETVGEVE RAGRRAHPVR
GDLSRVPECE RVVEEAAEAL GGLDVLVNNA GITRALDFLD TDEETYDAIF DLNMKGYFFC
ARSAVPHMLE AGGGSIVNIT SVHGFAGFPH HTAYAATKGA IIAFTRQLAI ELAGRGIRVN
AIGPGLIEVP RYYDIPGYSP EQGRELVPWG RVGKPKDVGP AAAFLASDAA DFITGQVLYV
DGGTTARMGL WWEQGEQPQ
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