Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0485 |
Symbol | |
ID | 4114670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 520718 |
End bp | 521440 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 638035273 |
Product | beta-lactamase-like protein |
Protein accession | YP_643271 |
Protein GI | 108803334 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.321406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCTCC TCTTCGCCGG GACCCGCGGC GAGATCGAGG CGCGCACCCC CAGGCACGCC ATGCACAGCG CGCTCGTCGT CTTCTGCGGC GGCGGCAGGG TCATGGTGGA CTGCGGCGCC GACTGGCTGG GGCGCTTCGG CGGGCTCGAC CCGGCGGCCG TCGTCGTCAC CCACGCCCAC CCGGACCACG CCTGGGGCCT CAGGGAGGGG GCTCCCTGCC CGGTCTACGC CACGCGAGAG TCCTGGGCGC TGATGGAGCG CTACCCCGTC CGCGAGCGGC GCGTGGTGGA GCCGCGCAGG CCCTTCCGGG CGGAGGGGCT CGTCTTCGAG GCCTTCCCGG TGGAGCACTC CACCCGCGCC CCGGCGGTGG GCTACAGGAT CTCGGCGGGC AGGACCGCGG TCTTCTACGC CCCCGACGTG GTCTACATCC ACGGCCGGGG GGAGGCGCTC CGGGGGGTCG AGCTGTACGC GGGCGACGGG GCGAGCGTCG CCCGCCCGCT GGTGCGCCGG CGCGGGGAGG CCCTCATCGG GCACGCCCCC ATCCGCACCC AGCTCACCTG GTGCGCGAAG GAGGGGGTGC GGCGGGCCGT CTTCACCCAC TGCGGCACGG AGATCGTGGC CGGCGACGAG GAGCGGCTGG AGAGAGAGGT CCGCCGCCTC GGCGCCGAGC GCGGCGTGGA GGCCGCGCTG GCATACGACG GGATGGAGGT CGGGGTTCCC TGA
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Protein sequence | MRLLFAGTRG EIEARTPRHA MHSALVVFCG GGRVMVDCGA DWLGRFGGLD PAAVVVTHAH PDHAWGLREG APCPVYATRE SWALMERYPV RERRVVEPRR PFRAEGLVFE AFPVEHSTRA PAVGYRISAG RTAVFYAPDV VYIHGRGEAL RGVELYAGDG ASVARPLVRR RGEALIGHAP IRTQLTWCAK EGVRRAVFTH CGTEIVAGDE ERLEREVRRL GAERGVEAAL AYDGMEVGVP
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