Gene Rxyl_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0485 
Symbol 
ID4114670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp520718 
End bp521440 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content76% 
IMG OID638035273 
Productbeta-lactamase-like protein 
Protein accessionYP_643271 
Protein GI108803334 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.321406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTCC TCTTCGCCGG GACCCGCGGC GAGATCGAGG CGCGCACCCC CAGGCACGCC 
ATGCACAGCG CGCTCGTCGT CTTCTGCGGC GGCGGCAGGG TCATGGTGGA CTGCGGCGCC
GACTGGCTGG GGCGCTTCGG CGGGCTCGAC CCGGCGGCCG TCGTCGTCAC CCACGCCCAC
CCGGACCACG CCTGGGGCCT CAGGGAGGGG GCTCCCTGCC CGGTCTACGC CACGCGAGAG
TCCTGGGCGC TGATGGAGCG CTACCCCGTC CGCGAGCGGC GCGTGGTGGA GCCGCGCAGG
CCCTTCCGGG CGGAGGGGCT CGTCTTCGAG GCCTTCCCGG TGGAGCACTC CACCCGCGCC
CCGGCGGTGG GCTACAGGAT CTCGGCGGGC AGGACCGCGG TCTTCTACGC CCCCGACGTG
GTCTACATCC ACGGCCGGGG GGAGGCGCTC CGGGGGGTCG AGCTGTACGC GGGCGACGGG
GCGAGCGTCG CCCGCCCGCT GGTGCGCCGG CGCGGGGAGG CCCTCATCGG GCACGCCCCC
ATCCGCACCC AGCTCACCTG GTGCGCGAAG GAGGGGGTGC GGCGGGCCGT CTTCACCCAC
TGCGGCACGG AGATCGTGGC CGGCGACGAG GAGCGGCTGG AGAGAGAGGT CCGCCGCCTC
GGCGCCGAGC GCGGCGTGGA GGCCGCGCTG GCATACGACG GGATGGAGGT CGGGGTTCCC
TGA
 
Protein sequence
MRLLFAGTRG EIEARTPRHA MHSALVVFCG GGRVMVDCGA DWLGRFGGLD PAAVVVTHAH 
PDHAWGLREG APCPVYATRE SWALMERYPV RERRVVEPRR PFRAEGLVFE AFPVEHSTRA
PAVGYRISAG RTAVFYAPDV VYIHGRGEAL RGVELYAGDG ASVARPLVRR RGEALIGHAP
IRTQLTWCAK EGVRRAVFTH CGTEIVAGDE ERLEREVRRL GAERGVEAAL AYDGMEVGVP