| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0388 |
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| Symbol | |
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| ID | 4117486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 416553 |
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| End bp | 417437 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638035177 |
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| Product | degV family protein |
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| Protein accession | YP_643175 |
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| Protein GI | 108803238 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0268218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAGA GAAGGGTCGC CGTCGTAACC GAGAGCGTCT CCTCCCTTCC CCGGCAGCTC
GCCGGCGAGC TGGAGATAGA GGTCGTTCCG GTGCCCTTCA GCTACGCCGG GCGCGACTAC
CTGGACGGGG AGGACATAAC CCCCGAGGAG TTCTACGGCA TCCTGCGGCC GGACCTCCCC
CCCGCGAGCA CCTCCTCCCC CTCCCCCGGC GCCTACCTGG AGGTCTTCAG GAGGCTGTGC
GGGGCGGGGC TGGAGGTTCT GTGCGTCACC GCCACCGGCA AGATCGCCAC CCGGATGCCG
GAGTCGGCCC GGATGGGCCG GGAGCTGGCG CGCGAGGAGG GCGTGGAGGG CAGGATAGAG
GTGCTCGACT CCGGCTCGGC GGCGATGGGA GAGGGGTTCC TGGCGCTGGA GGCCGCCCGG
ATGGCCTGGG AGGGCGCGGG GATGGAGGAG ATCCTCTCGC GCCTCGAGGA GCTCTCGGGG
CGCGTCAGCC TGCTGGTCAC CCTGGACACC CTGCAGTACC TCTCCAAGAC GGCGCGTCTC
CGGCGGCTCG CGGCCCTGTT CGCCAAGGCG CTGCAGATAA AGCCGGTCAT CCTCTTCGAG
CGCGGCGAGG TGCGCCCGCT GGAGACCCCC AGGACGCGCA GAAAGGCGGT GGAGCGCCTG
CTCGCGCTGG CCGAAGAGCG CGTCTCGGGG GAGGGGCCCC TGCACGTGGC CGTGCAGCAC
GCCGCGGCCG GCGAGGAGGC CGGGGAGCTT GCGGAGGAGG TCCGGGAGCG CCTCGGGCCC
CGGGAGCTGC TCGTCGCCGA GTTCTCCCCG GTGATGACCA GCTACGCCGG CCCCGGGCTG
CTGGGGCTGG CCCTCTACGA GGAGCCGCCG GGCGCCGGCC CTTGA
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| Protein sequence | MAERRVAVVT ESVSSLPRQL AGELEIEVVP VPFSYAGRDY LDGEDITPEE FYGILRPDLP
PASTSSPSPG AYLEVFRRLC GAGLEVLCVT ATGKIATRMP ESARMGRELA REEGVEGRIE
VLDSGSAAMG EGFLALEAAR MAWEGAGMEE ILSRLEELSG RVSLLVTLDT LQYLSKTARL
RRLAALFAKA LQIKPVILFE RGEVRPLETP RTRRKAVERL LALAEERVSG EGPLHVAVQH
AAAGEEAGEL AEEVRERLGP RELLVAEFSP VMTSYAGPGL LGLALYEEPP GAGP
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