Gene Rxyl_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0352 
Symbol 
ID4115075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp378084 
End bp378896 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content71% 
IMG OID638035142 
Productputative cyclase 
Protein accessionYP_643140 
Protein GI108803203 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.746436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATCA TCGAGTCCGC CGGCGTCGCC GGGGTGTTGT CCGGGGTGCG GAAAGGGCGC 
GTCTACGACC TGGGCGTGCC GCTGAAGAAC TTCATGCCCC ACGCGCCGCT GCACCCGCCC
TTTATCTTCG CGCAGTGGGC CATGCACGGC GACTACCACA ACGGAAGCTG CACGCCCTCG
AACGACCTGA TCGTGATGGG CGGCCACGTC GGCACCCACG TCGACGCCCT GGGGCACATC
GCCAGGGAGG GCAGGCTCTA CGGCGGCGCG GAAGCGAGCG AGGTCCAGCA CGGCCAGCTC
GGCCTCTCCG AGGGCGGCGT GGACCAGATA CCGCCGGTCA TCCGGCGCGG GGTGCTCCTC
GACGTCGCGG GGCACCTCGG CGTGGAGCGC ATGGAGCCGA ACCAGCCCGT AGGCGCGGAG
CTTCTGGAAG CCGTCGCCGA GGGGCAGGGA GTCGAGGTGG GGGAGGGGGA TGTGGTGCTG
GTGCGCACGG GCTGGATCCA GACCTTCGAG GACGGCCCCA CCTTCGTCGG CGACAAAGGC
GGCTGTCCCG GCGTGGACCT CGACGGGGCC CGGTGGGTCT CCGGGCGCGG GGCCTACATG
ACCGGCGCGG ATACCCTGGC CTACGAGGTC TGGCCCTCCC ACGAGCTGCC CGTGCACGCC
CACCTGATCC CGGAGTCCGG CATACCCATC ATCGAGATGC TCGACCTCGA AGAGCTCGCC
GCCGACGGCG TCCACGAGTT CGCCTTCGTC ATGATCCCGC TCAACATCAA GGGGGGCACC
GCCTCCCCGG TCCGCCCGCT CGCGCTGGTG TAG
 
Protein sequence
MPIIESAGVA GVLSGVRKGR VYDLGVPLKN FMPHAPLHPP FIFAQWAMHG DYHNGSCTPS 
NDLIVMGGHV GTHVDALGHI AREGRLYGGA EASEVQHGQL GLSEGGVDQI PPVIRRGVLL
DVAGHLGVER MEPNQPVGAE LLEAVAEGQG VEVGEGDVVL VRTGWIQTFE DGPTFVGDKG
GCPGVDLDGA RWVSGRGAYM TGADTLAYEV WPSHELPVHA HLIPESGIPI IEMLDLEELA
ADGVHEFAFV MIPLNIKGGT ASPVRPLALV