Gene Rxyl_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0293 
Symbol 
ID4117820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp301884 
End bp303482 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content76% 
IMG OID638035082 
ProductDNA mismatch repair protein MutL 
Protein accessionYP_643081 
Protein GI108803144 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGCTCT TCCCGCGCCT GGTCTCCGAG GGGCCCGCGG GCTACGACGG GGGAGGCCGG 
GTGCGGATCC TCCCCCCGGA CGTGGCGCGC AGGATCGCCG CCGGCGAGGT CATAGAGCGC
CCCGCCTCGG CGGTGAAGGA GCTGGTGGAG AACGCCCTGG ACGCCGGCGC GACGCGGGTA
GAGGTGGAGG TGGAGGGTGG CGGGACCTCC CTGATCCGGG TGCGCGACGA CGGGGCCGGC
ATGCTTCCCG GGGACGCCGA GCGCGCTCTC GGGCGGCACG CCACGAGCAA GCTCCGCTGC
GTGGACGACC TCGCCCGGGT GAGCACCCTG GGCTTCCGGG GGGAGGCGCT GCACGCCATC
GGCGCGGTCT CCTCGCTCTC GCTGACGACG CGCGCCGCCG GCGAGGCGCT CGGCCGGCGC
GTGAGGGTTC TGGCCGGCGA GCCGGCGGGC TCGGAGCCTG CCGCCCACCC GCCGGGCACC
ACGGTGGAGG TGCGCGACCT GTTCCTGAAC CTGCCGGTGC GGCGCGGCTT TCTCGGGACG
GCGCGGGCGG AGGGGAACGC GGTGGCGCGC GCCGTCGAGG CCCTGGCGCT CAGCCGCCCG
GAGGTGGGCT TTTTCCTGCG GGCGGAGGGG CGCCCGGCGC TCTCCCTGCC GCCCGCCGCC
GGCCTGCGGG AGCGGGTGGC CCAGGTGCAC GGCCTGGCGC TCGCCGAGAC CCTGCTGCCG
CTCTCCGACC CGGCGGTGCG GGGGCTTGTG AGCCCGCTGT CGGCGAGCTT CCCGACCCGC
CGCTACCTGC ACGTGACGGT GAACGGCCGG GTGGTGGACC CGGACTCCTT CGCCCCGGCG
GTGGCGAAGG CCTACGCCGA CCTGCTCCCG AAGGGCCGCC ACCCGGCGGC CTTTCTGCGC
CTGGAGCTGG ATCCGGAGGA GGTGGACGTG AACGTCCACC CGGCGAAGCG GGCGGTGCGG
CTGCGGGGCG GGAGGTCCGT CTACCCGCTG GTGGTCGGCG CGGTGCGCTC GGCGCTGGAG
CTCGGCAGGC GGGGGCGCGG AGCCGCCGCG CCCGGGAGGG AGGAGCCCGC CCTCGCGCTC
ATCGGCCAGT TCGCCGGGCG GTGCATCGTG GCCCAGCGGG GGGAGGAGCT GCTGCTCATC
GACCAGCACG GGGCGCACGA GCGGGTCCTG TACGAGCGGC TGCTCTACGG CCCTCCGGAG
CGGCCCGTCG CCCTGGACCC TCCGCGGGTG GTCCGGCTGC CCGGGGAGCT CGGGCGGGAG
GTTCTCTGGT CTTTCGAGGA GGAGCTGGCC TCGGCGGGCT TCAGGGTGGA GCCCTTCGGA
GAGGACGCGG TGCGGGTGCT CGCCGCGCCG CGGGGCGTGG GGGATGTGGC GGCGGGTTTG
GTCGGGGCCG CGCAGGCCCT CGCGGGCGGG GAGGACTACC TGAAGGCGCT GGCGTGCAGG
GGCGCGGACC GCTTCGGGGA GGAGCTGGAT CGCGCCAGGA TGGCCCGGCT TCTAGAGGAC
TGGGCGTCCA CCAGGTTCCC CGAAGTTTGC CCGCATGGAC GCCCCATCGT CCGGCGCATC
AGCCTGGGGG AGCTGCTGCG CGGCTTCGGG AGGGTCTAG
 
Protein sequence
MRLFPRLVSE GPAGYDGGGR VRILPPDVAR RIAAGEVIER PASAVKELVE NALDAGATRV 
EVEVEGGGTS LIRVRDDGAG MLPGDAERAL GRHATSKLRC VDDLARVSTL GFRGEALHAI
GAVSSLSLTT RAAGEALGRR VRVLAGEPAG SEPAAHPPGT TVEVRDLFLN LPVRRGFLGT
ARAEGNAVAR AVEALALSRP EVGFFLRAEG RPALSLPPAA GLRERVAQVH GLALAETLLP
LSDPAVRGLV SPLSASFPTR RYLHVTVNGR VVDPDSFAPA VAKAYADLLP KGRHPAAFLR
LELDPEEVDV NVHPAKRAVR LRGGRSVYPL VVGAVRSALE LGRRGRGAAA PGREEPALAL
IGQFAGRCIV AQRGEELLLI DQHGAHERVL YERLLYGPPE RPVALDPPRV VRLPGELGRE
VLWSFEEELA SAGFRVEPFG EDAVRVLAAP RGVGDVAAGL VGAAQALAGG EDYLKALACR
GADRFGEELD RARMARLLED WASTRFPEVC PHGRPIVRRI SLGELLRGFG RV