| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0263 |
|---|
| Symbol | |
|---|
| ID | 4117753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 269314 |
|---|
| End bp | 271203 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638035053 |
|---|
| Product | CRISPR-associated Cmr2 family protein |
|---|
| Protein accession | YP_643052 |
|---|
| Protein GI | 108803115 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1353] Predicted hydrolase of the HD superfamily (permuted catalytic motifs) |
|---|
| TIGRFAM ID | [TIGR02577] CRISPR-associated protein, Crm2 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC AATCACTCCA CTTCACCCTG GGTCCGGTGC AGGGCTTCGT CGGACAGGCG
CGGCGCACCC GCGACCTGTG GGCGGGCTCC TTCCTGCTCT CCTACCTCGC CGGGCAGGCG
ATGAAGGCGG TACTCGAAGG TGGAGGCGAA ATCGTCTTTC CCGAGATCGG CACCCGGGAG
AGGCCCACCG ACCCGCTTCT CGCCGCGATC CTGAAGAGAC CCATCTCTGA AAACCCGCGC
CCCGAGATCG GCTCGCTCCC CAACCGCTTC AAGGCCGGGG TGCAGGATGG CTTCGATCCG
GAGCGCTGCG AGGAGGCGGT GAGGGAAGCC TGGAAGAGGA TCGCCAGCAG CGTCTGGGAG
CGGTACGTCG AGCCGGTAGC GGCTTACGGC AAGGGCACGA AGGAGATCTG GGAGCGGCAG
GTCGAGGGCT TCTGGGAGAT GAGCTGGGTC ATAGGCGAGG ATCCCGGAGA CCGCAGCGAC
CAGCGCTGGC TCGATCTGCG CAAGAACTGG CGTACCCACC ATCCGCCCTC CGAGCCGGGG
GACAAGTGCA CCCTGATGGG GAGCTGGCAG GAGCTCTCGG GGTACGTGAG AGCGAGGGAG
CGCGAGGCGC AGGACAGGTT CTGGGATGAG CTCCGCAAGA AAGCCGGCAC GCTCAACCTG
GGCGAGCACG AGCGGCTGTG CGCGATCGCC CTCATCAAGC GCCTCTTCCC GGAGGTCGCG
AAAGAGACCA TCGGCTGGGA GCTCAACGCG AGAACCTGGC CCTCGACGCC GTACATGGCG
GCCGTGCCCT GGATCGAGGA GGCGCGCAAT AAACCAGAGG CCAAGAAGCA TCTCGAGCTG
GTACGCTCCA GCGGGGCGCG AAGCTCGGCC TTCGGCGAGT ACAACACCAA CCTCGCGTGC
CCGAAGAATG AGAAGGACTT CGCCCGGCTC GACGGCAACT TCTTCCACAG AGCGGCCCTC
GAGAACGAGC GGGCAACCCC GGACCTCTCT CCCCAGGAAC GAAAAGGCCT TCTCGAAAAC
CTGAAGGCTC TCAATGAGGC CGTGGGGCAC CCGGCCTCGA CCTTCTACGC CCTCTTGCTC
ATGGACGGCG ACAGGCTCGG CAGCCTGCTG CAGAACAAGG ACATCGAGCC CGAGCTCATC
TCCCGGGCCC TCGCGGAGTT CACTGCGGAG GTCGAGGGGA TCATCGGAGA TCACTGCGGC
AGGACGGTCT ACGCCGGAGG CGACGACGTG CTCGCGCTCC TGCCGGTCGA CCGGGCGCTA
CAGGCCGCGG CGGAGTTGCG CTGCAGGTTC CGCCGCGCGT TCGGCTCCGT GTTCGGCGAC
CGGAGGCCGG TAGACAAGGA TGGCAAAACC CTCAAGACGA CCATCTCCGC CGGGCTCGTC
TACGCCACCT ACAACACGCC GCTGCGGGCG GTGATGCAGG AGGCGCACCG GCTGCTCGAC
GAGGTCGCCA AGGACGAGAA CGGCCGCGAC AGCATCGCGG CGAGCGTTCT CGCCGGCAGC
GGGCGCACCG TCCAGTGGGT CTCGGCCTGG GACGAGGGGC CGGGTGACGA GCAAATGATC
ACGAGCACCC TGACGGGCCT CGCAGAAGAC CTGGAGGAGG AGTTCGCGGG CCGCTTCTTC
TACAACGTCC GCGAGCGTTT CGATGTTCTC ACCGGCGACG GCGATAGGCT CATCGAGGAT
CTCGACGCGC AGGCCCTCCT CGTCGCCGAG TACCTGAAGA GCCGGGAGCG CGACGGAGAC
AGGAGGGAGG CCGAGAAAAC CATAGAGCGG CTCCTCAAAG TATGCCGCCG CCGGAAGGGA
GGAGAGGCGC CCGACGAGGG CACGCTCGAC GTCTCGGGGG CGATGCTGGT CCGGTTTCTC
GCGACGAAGG GACGGGGGGT GGAGAGATGA
|
|---|
| Protein sequence | MKKQSLHFTL GPVQGFVGQA RRTRDLWAGS FLLSYLAGQA MKAVLEGGGE IVFPEIGTRE
RPTDPLLAAI LKRPISENPR PEIGSLPNRF KAGVQDGFDP ERCEEAVREA WKRIASSVWE
RYVEPVAAYG KGTKEIWERQ VEGFWEMSWV IGEDPGDRSD QRWLDLRKNW RTHHPPSEPG
DKCTLMGSWQ ELSGYVRARE REAQDRFWDE LRKKAGTLNL GEHERLCAIA LIKRLFPEVA
KETIGWELNA RTWPSTPYMA AVPWIEEARN KPEAKKHLEL VRSSGARSSA FGEYNTNLAC
PKNEKDFARL DGNFFHRAAL ENERATPDLS PQERKGLLEN LKALNEAVGH PASTFYALLL
MDGDRLGSLL QNKDIEPELI SRALAEFTAE VEGIIGDHCG RTVYAGGDDV LALLPVDRAL
QAAAELRCRF RRAFGSVFGD RRPVDKDGKT LKTTISAGLV YATYNTPLRA VMQEAHRLLD
EVAKDENGRD SIAASVLAGS GRTVQWVSAW DEGPGDEQMI TSTLTGLAED LEEEFAGRFF
YNVRERFDVL TGDGDRLIED LDAQALLVAE YLKSRERDGD RREAEKTIER LLKVCRRRKG
GEAPDEGTLD VSGAMLVRFL ATKGRGVER
|
|---|
| |