Gene Rxyl_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0256 
Symbol 
ID4116087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp263398 
End bp263667 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content59% 
IMG OID638035046 
ProductCRISPR-associated Cas2 family protein 
Protein accessionYP_643045 
Protein GI108803108 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTACGTGA TCATGGTCTA CGACGTGAAC GTCAAGCGGG TGGTCAAGGT GCTCAAGGTC 
GGCCGGAAGT ACCTCGAGCA CGTCCAGAAC TCCGTGCTTG AGGGGGAGCT GAGCCCCGCC
CAGTACAAGA AGCTCAAGCA CGAGGTGGAG AAGACGATAG ACCCCGAGGA GGATACCGTA
CGCTTCTACC TACTTCGCAC CACGAGATAC CTCACCACCG AGGAGCTCGG CCTGCCCTCA
CGCAATGAGC CGGATAGCAG CTTCCTGTAG
 
Protein sequence
MYVIMVYDVN VKRVVKVLKV GRKYLEHVQN SVLEGELSPA QYKKLKHEVE KTIDPEEDTV 
RFYLLRTTRY LTTEELGLPS RNEPDSSFL