Gene Rxyl_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0240 
Symbol 
ID4117730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp247109 
End bp247774 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content73% 
IMG OID638035030 
ProductGntR family transcriptional regulator 
Protein accessionYP_643029 
Protein GI108803092 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.589617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGAGC TGAGGCGGCC GGAGCCGCTC TACCGGCAGG TGTACGAGGT GCTGCGGCGG 
AGGATACTGG CCGGGGAGTA CGGGGCGGGC GAGGTCTTGC AGGAGAGCCG GGCGGCGGAG 
GAGCTGCGGG TGAGCCGGAC CCCGGTCCGG GAGGCGCTGC GGCAGCTGGA GCGGGAGGGG 
CTCCTGGTGG CGCGGGGGAC CGAGCGGGTG GTGGCGGACC CCTCCAGGGA GGAGTTCGTG 
GACCTGTACA CCTGCCGGGC GGCGCTGGAG GGGCTGGTGG CCGAGCGGGC GGCGCGGCTC 
GCGGAGGAGG AGGAGCTGAG GGAGATGGAG GAGGCGCTGG AGGAGGCGCG GCGGGCGGTT 
GCGGCGGGGG ACCACGGGGG CGTGCTCTCC GCCAACACCC GCTTCCACGA CCTGATGGTC 
AGGAGCGCCC GGATGCCGCC GCTGGAGCGC CTGATGGACA CGCTGCGCGG CCAGATCCTG 
GTCGCCCGCC GGCACATCCT CTCCGACGAG AGGATAGAGG CTGAGATCTG CGAGGAGCAC 
GCCTCCATAC TGGAGGCCAT CCGGCGGAGG GACGTGGGGG CCGCCCGGGA GAGGATGCAG 
AGGCACATGC AGAACGACAT ACGGCGCGGG GTGGCCAACT TCGACGCCGC GCCGGGGGAG 
GAGTGA
 
Protein sequence
MEELRRPEPL YRQVYEVLRR RILAGEYGAG EVLQESRAAE ELRVSRTPVR EALRQLEREG 
LLVARGTERV VADPSREEFV DLYTCRAALE GLVAERAARL AEEEELREME EALEEARRAV 
AAGDHGGVLS ANTRFHDLMV RSARMPPLER LMDTLRGQIL VARRHILSDE RIEAEICEEH 
ASILEAIRRR DVGAARERMQ RHMQNDIRRG VANFDAAPGE E