Gene Rsph17029_4116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_4116 
Symbol 
ID4894960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009040 
Strand
Start bp59035 
End bp59835 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content64% 
IMG OID640110514 
ProductAraC family transcriptional regulator 
Protein accessionYP_001041826 
Protein GI126464850 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones116 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones114 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTGG ACGTCCGTCG CGACTGGCTC GCCTATGTCG ACGAGATCCC GCGTGCGTTG 
GTGGCCGCCA ACGCGGTCGC CACCCTTGAC GCCCTGGAGC AATCGCCCCG GCACCATCAC
CAAAAGGCGC AACTGCTTTT CACGGTGCGG GGCGTCGTCA ATTGCGAGGT CGACGGCGCA
GTCTGGATCG TACCGCCGCA ATGCGCCGTG TGGATTCCCA GCGGGCTGCC CCATTCCGTT
TTCGGCTCGG GCGAGGTGGA GTGTCTCTCT CTTTTCATTG ATCCTCCCGA CTCCGCGAAC
CTGCCGAAAG ATTGCTGCAC GATCGCGGTG TCGCGGTTTT TCCGCGAGTT GCTGATGCGG
GCAAACGCTC TGCCGGACCT CTATGACGTC GACGGACCGG ATGGGCGGAT CGTGTCCGTT
CTCTTCGATG AGCTGGCTGT GGCACCGGTC GAGGATCTCT GCCTGCCCAT CCCCGGCGAT
CCGCGCCTGA AGAAGCTCAC CGACCTGTTG ATCGCGGCGC CCGCGGATCA CGCGAGCGTC
GCGGAGTGGG CCTCCCGCGT CGCGCTCAGC GAGCGCAGCC TGAGCCGTCT TTTGGCCGAC
GAGGTGGGCA TGAGTTTCGG CCGCTGGCGC CGACAGTTGC ATATCGTGCT TGCCTTGCGG
CGCCTGAGCG CTGGTCAGTC GGTTCAGGCC ATCGCCATCG ATCTCGGCTA TGAAAGCGCC
AGCAGTTTCG TGACCATGTT TCGAAAGATG GTCGGCAAGC CTCCAGGCCG CTATCTGCTC
GAGCGGAACC GTTTACGATA G
 
Protein sequence
MYLDVRRDWL AYVDEIPRAL VAANAVATLD ALEQSPRHHH QKAQLLFTVR GVVNCEVDGA 
VWIVPPQCAV WIPSGLPHSV FGSGEVECLS LFIDPPDSAN LPKDCCTIAV SRFFRELLMR
ANALPDLYDV DGPDGRIVSV LFDELAVAPV EDLCLPIPGD PRLKKLTDLL IAAPADHASV
AEWASRVALS ERSLSRLLAD EVGMSFGRWR RQLHIVLALR RLSAGQSVQA IAIDLGYESA
SSFVTMFRKM VGKPPGRYLL ERNRLR