Gene Rsph17029_3983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3983 
Symbol 
ID4899130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp1125862 
End bp1127535 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content71% 
IMG OID640114586 
ProductABC transporter related 
Protein accessionYP_001045833 
Protein GI126464720 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC TTGCCATCCG CGACCTCGAG ATCCGCTTCC GCGACGGCGC CGAGGAGCGG 
CTTCTCATTG ACCGGGTCTC GCTCGACCTG AAGAAGGGCG AGATCCTGGG CCTCGTGGGC
GAGAGCGGCT CAGGCAAGAG CCTGCTCTGC CGCGCGGTGA TGGGGCTTCT GCCTTCGCGC
AAGCTGTCGG TCACGAAGGG GCATGTGAGC CTTGCCGGGC GCGACATCAC CCGCCTGCCC
GAGCGCGAGA TGCTGGACAT CCGCGGGCGG CGGATCGGGA TGATCTTCCA GAACCCGACC
AGCCACCTCG ATCCGGTGAT GCGGATCGGC GATCAGATCG CCGAAGGGCT CTGCCGTCAC
CGCGGCCTGC CCCGCGCCGC CGCGCGCGAG GAGGCGGTGA CGATCCTGCG GCAGGTGGGC
TTCACCGACC CGCCGCGGCA GGCGCGGATG TATGCGCACG AATTCTCGGG CGGGATGCGC
CAGCGCGCGA TGATCGCGGT GGCGCTCGCC TGCGATCCCG ACATCCTGAT CGCGGACGAG
CCCACCACCG CGCTCGACGT GACGATCCAG GCGCAGATCC TGCGCCAGCT GGCCGATCTG
CGCGAAAGCC GGGGTCTCTC GATCATCCTC ATCACCCACG ATCTGGGCGT CGTGGCCCAG
ACCTGCGACC GGATCGCCGT CATGCGCGAC GGGCGCATCG TCGAGGAGGG CGAGAAGCGC
TGCCTGCTCG CGGCCCCGCA GCATCCCTAC ACCCAGGCGC TGATCGCGTC GCATCCCTCG
CTCCCCCACG AGGAAGCGGT GGGCGAGCCC TATCAGCCCC ACAGCCGCCC GCTGATCGAG
ATCGACGATC TCGAGGTGAG CTTCCCCGCC GGAGGATCGC CCTGGGCGCG GCGGCGCTTC
AAGGCGGTGG ACGGGGTGAG CCTGCGCATC GGGCGCGGCG AGACGGTGGG GATCGTGGGC
GAGAGCGGCT CGGGCAAGAG CACGCTCGCC CGCACGCTCC TCGGGCTTCA GCCCGTCACC
TCGGGTCATG TGGCCTTCGA CGGCTCGGTG CTGACGCTCG AACGCGCACG GACGCTCGCC
CGGCTGCGGC GCGAGGCGGC GATGGTGTTT CAGGATCCGT TCAACGCGCT GAACCCGCGC
CTCACCGTGG GCGAGACGCT GGCCGAGGTG CTGCGCGTGC AGGGCAAAGT GGCGCGCGCA
GCCATCCCCG CGCGGGTGAA CGAGCTTCTC GACATGGTGG GGCTCGACCG CGGCTTCGCC
GGCCGCAGGC CCCGCAGCCT GAGCGGCGGC CAGTGCCAGC GTGCGGGCAT CGCGCGGGCG
CTCGCCGTCG ATCCGACGCT GATCGTGGCC GACGAATGCG TGGCGGCCCT CGATGTCACG
ATTCAGGCGC AGATCGTGGA GCTCTTCCGC AGCCTTGTGG AGGCGCAGGG GCTCACGCTC
CTCTTCATCG CGCACGATCT GGCCATCGTC CGCTCGCTCT GCGAGCGGGT CGTGGTCATG
CAGCACGGGC GCGTGGTCGA GGACGGGCCC TCGGCCGAGG TCTTCGCCCG CCCCTCCCAT
CCCTATACCG CGGCGCTGAT CGCGGCCATC CCGAGCATCG ACCCCGACCA GCCGCTGGCG
GCCGCGATGC CCGACCCCAG AAGCCAGACC CAACAGGAAG GACTGCTCAC ATGA
 
Protein sequence
MSLLAIRDLE IRFRDGAEER LLIDRVSLDL KKGEILGLVG ESGSGKSLLC RAVMGLLPSR 
KLSVTKGHVS LAGRDITRLP EREMLDIRGR RIGMIFQNPT SHLDPVMRIG DQIAEGLCRH
RGLPRAAARE EAVTILRQVG FTDPPRQARM YAHEFSGGMR QRAMIAVALA CDPDILIADE
PTTALDVTIQ AQILRQLADL RESRGLSIIL ITHDLGVVAQ TCDRIAVMRD GRIVEEGEKR
CLLAAPQHPY TQALIASHPS LPHEEAVGEP YQPHSRPLIE IDDLEVSFPA GGSPWARRRF
KAVDGVSLRI GRGETVGIVG ESGSGKSTLA RTLLGLQPVT SGHVAFDGSV LTLERARTLA
RLRREAAMVF QDPFNALNPR LTVGETLAEV LRVQGKVARA AIPARVNELL DMVGLDRGFA
GRRPRSLSGG QCQRAGIARA LAVDPTLIVA DECVAALDVT IQAQIVELFR SLVEAQGLTL
LFIAHDLAIV RSLCERVVVM QHGRVVEDGP SAEVFARPSH PYTAALIAAI PSIDPDQPLA
AAMPDPRSQT QQEGLLT