| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3933 |
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| Symbol | |
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| ID | 4898489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | + |
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| Start bp | 1066796 |
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| End bp | 1068349 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640114536 |
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| Product | electron transport complex, RnfABCDGE type, C subunit |
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| Protein accession | YP_001045783 |
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| Protein GI | 126464670 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00505107 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTTC CCCATTTCGC GGCCCTCTTC CGGCCCTCGC AGTTCTTCGG CATCCGCGGC
GGCGTCCACC CCGAGACGCG CAAGCATCTG AGCTCGGAAA GCCCCATCGA GGACATGCCG
ATCCCCACGC TGATCCGCGT GCCGCTCCAG CAGCATATCG GCGCCGAGGC CGAGCCGCTG
GTCCGGCGCG ACGATCTGGT GGTGAAGGGC CAGCTGATCG GGCGCGCCCG CGGCCCCGTC
TCGGCCAACA TCCATGCGCC GACCTCGGGC CGGGTGATCG CCGTGGGCCA CTTCGCGGCC
CCCCATCCCT CGGGGCTGCC CATTCCCACC ATCACCATCC GCACCGACGG GCAGGACAGC
TGGGGGCCCC GGCTCGGCCG CCTCCGGCCC GAGAACGCCA CCCCCGAGGA GATCGCGGCC
AAGGTGGCCG AGGCGGGGAT CGTGGGCATG GGCGGCGCCA CCTTCCCCTC GGCGGTGAAG
CTGAACCTGC GGTCGAAATA CGACCTCCAC ACGCTCGTCA TCAACGGGGC AGAGTGCGAG
CCCTATCTCA CCTGCGACGA CCGGCTGATG CGCGAGCGCG CCGAGGAGAT CGCCGACGGC
GTGGGGATCA TGGCCCGGGC TCTGGGCGTG ACGCAGATCG TCGTGGCCAT CGAGTCGAAC
AAGGCCGAGG CGATCTCGGC CATGCAGCGC TTCGACCGCG CGCTCGACAT CCCGCTCCGG
GTGCAGGTGG TGCCGACCCA GTATCCGATG GGGTCGGAGA AGCATCTGGT GAAGATCCTG
ACCGGGCGCG AGACGCCGGC GCGGGCGCTG ACGGCCGATC TGGGCGTCGT CGTCCACAAT
GCCGCCACCG CCCATGCCGT CCATCTCGCG GTGCGCTACG GCGAGCCGCT CCTGTCGCGC
GTGGTCACGG TCTCGGGTCG GGCGGTGCGG CGGCCTGCCA ATGTGCGCGT CCTGATCGGC
ACGCCGGTGT CGGAGGTCAT CGCTTATTGC GGCGGCTATG CCGAAGAGCC CGACCGGCTG
CTCCTCGGCG GGCCGATGAT GGGTCAGCCG ATCCAGAACC TGCGCGTGCC GTTGGTGAAG
GGCACGAGCG GCATCCTCGC CCTGACGCGC GCCGAGACCC CGGGCGTCGA TACGATGCCC
TGCATCCGCT GCGGGCGCTG CGCGCAGGCC TGCCCGGTGG GCCTCACGCC CTTCGAGCTC
AATGCCCGCA TCCAGTCCGA GGATCTCGAG GGGGCGGGGC GGATCGGGCT TCTCGACTGC
ATCACCTGCG GCTGCTGCTC CTTCACCTGC CCCTCGAACC TCCCGCTCGT GCAGACGATC
CATTACGCCA AGGGCAAGCT CGCCGAGGCC GAGGGGCGCA AGCACCAGCA GGAAGAGACG
AAGCGCCTCG CCGCCGCGCG GAAGGCCCGC GAGGAGGCCG CGGCCGAGGC CAAGCGGCAG
ATGATGGCGA AACGCAAGGC CGAGATGGAG GCCAGGAAGC AGCGCGAGGC CGCCGCGCCG
CCGCCGCCAC CGCTCGCTCA GGCGATGGCC CAGCCCGGAG GTGCCGCGCA ATGA
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| Protein sequence | MSFPHFAALF RPSQFFGIRG GVHPETRKHL SSESPIEDMP IPTLIRVPLQ QHIGAEAEPL
VRRDDLVVKG QLIGRARGPV SANIHAPTSG RVIAVGHFAA PHPSGLPIPT ITIRTDGQDS
WGPRLGRLRP ENATPEEIAA KVAEAGIVGM GGATFPSAVK LNLRSKYDLH TLVINGAECE
PYLTCDDRLM RERAEEIADG VGIMARALGV TQIVVAIESN KAEAISAMQR FDRALDIPLR
VQVVPTQYPM GSEKHLVKIL TGRETPARAL TADLGVVVHN AATAHAVHLA VRYGEPLLSR
VVTVSGRAVR RPANVRVLIG TPVSEVIAYC GGYAEEPDRL LLGGPMMGQP IQNLRVPLVK
GTSGILALTR AETPGVDTMP CIRCGRCAQA CPVGLTPFEL NARIQSEDLE GAGRIGLLDC
ITCGCCSFTC PSNLPLVQTI HYAKGKLAEA EGRKHQQEET KRLAAARKAR EEAAAEAKRQ
MMAKRKAEME ARKQREAAAP PPPPLAQAMA QPGGAAQ
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