| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3893 |
|---|
| Symbol | |
|---|
| ID | 4899181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 1025189 |
|---|
| End bp | 1026085 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640114497 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001045744 |
|---|
| Protein GI | 126464631 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.199081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0200217 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCC GGATGCTCCG CACGCTGATC GCGGTCAGCG AGCACGGGAC CTTCAGCGCG
GCGGCGGAGT CGGTGTTCCT GACCCATGCC GCGGTCAGCC AGCAGATGCA GAAGCTGGAA
GAGGATTTCG GCATCCGCCT CTTCGACCGC TCGCGGCGCA GCCCCGAACT GACGCCCTTG
GGGCAGGCCT TCGTCAGCCG CGCGCGCGAT GTGGTGGCGG CCTATGACGG GCTCGCGCTC
GCGGTGACGG GAGAGGGCAG CGTCGAGGGC ACGATCCGGC TCGGCGCCGT GCCCACCACG
CTGATCGGGC TCATCCCGGT CGCGGTGACG CTGCTCAAGC GCGACTTTCC GGCGCTCAGT
GTGACCATCG TGCCGGGGCT GACCACGAAC CTCCTCCAGC AGGTCGAGCG CGGCTCGCTC
GATGCGGCGG TGCTCACGCG GCCCCATGTG GTGCCGCGGC GGATGGTCTG GAACCATGTG
GCCGACGAGC CGCTCGAGCT TCTGGCCTCG CACGACACGG CGAGCGACGA CCCGCTGGAA
TTGCTGGCCA CGCAGCCCTT CATCCGCTTC TCGCGGCAGG CGGTGGTGGG CGGGCTGATC
GAGGCCTGGC TCCAGCAGCG CCGGATCGAG GTGCGCGAGA GCATGGAGCT CGAGAGCCTC
GAGACGATCT CGAGCATGGT GCTGGCGAAC CTCGGCGTCT CCATCGCGCC GCGTCCCTGC
GTCGATCACA TCAACCCCCT GCCGCTCAAG CACATCCCGC TCGATGCGGG CGGGCTCCGA
CGCCAGCTCG GCCTCAGCAG CCGCGCCGAC AATGCGCGCC CGCGCGTCCT GCGCATCCTG
CACGAGAAGC TGGTGCAGGC AGTGGGCATC GGCGTGCTCG ACCCTTCTTC CCTCTGA
|
|---|
| Protein sequence | MSIRMLRTLI AVSEHGTFSA AAESVFLTHA AVSQQMQKLE EDFGIRLFDR SRRSPELTPL
GQAFVSRARD VVAAYDGLAL AVTGEGSVEG TIRLGAVPTT LIGLIPVAVT LLKRDFPALS
VTIVPGLTTN LLQQVERGSL DAAVLTRPHV VPRRMVWNHV ADEPLELLAS HDTASDDPLE
LLATQPFIRF SRQAVVGGLI EAWLQQRRIE VRESMELESL ETISSMVLAN LGVSIAPRPC
VDHINPLPLK HIPLDAGGLR RQLGLSSRAD NARPRVLRIL HEKLVQAVGI GVLDPSSL
|
|---|
| |