| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3870 |
|---|
| Symbol | |
|---|
| ID | 4898524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 997542 |
|---|
| End bp | 999158 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640114474 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001045721 |
|---|
| Protein GI | 126464608 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0563781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGGG CATGGGGTTT TGCGCTGGCG ATCCTCTTGG CCGCGCCGCC CGCCGCGGCG
GGCGGGATCA CGGTGGACGA GACATATTGG AACCCGCAGC CGGCCGAGGG CGACCTCGTG
CTGCCGATGC CCTGCGGCGG CGCGATGGCG TTCCGCCCGG TGGCGACACC CAATGCCGAC
GGTGCGGTGG GCGACGTTCC GGTCATCCTC GGTCGCGAGG ACGAGGACCA GCCCTATCTG
GACGGCACGC GGCGCTCCTA TGTCTCGGGA GGGTTTCCGG GGACGGGCGA GGCGGAAGCC
AAAGCCATGT TCTACATGGC GAAATACGAG ATCGCCGAGG CGCAGTACCG CGCTGTGACG
GAAGGCTGCC CGCAGAAGGA GCCGCGCCGG CGCGACTTCC TGCCGGTGAC GGGTGTGACG
AAGACCGAGC TTGACGCCTT CGCGCAGGCC TGGACGGTCT GGCTGATGCG GAACGCGCCG
GAAAGCCTCG CCCTCGCCGG TGCGGCGCCG GCCCATCTGC GGCTTCCGAC CGAGGAGGAG
TGGGAGTTCG CCGCCCGGGG CGGTCTGGCC GTCGATCCGG CGCTGTTCCG CGGCGCGCTG
CCGCCGATCC CGCCCGGTCA CTCCGCGTCC GAATACATCG CGCATGGCGG CAACGACAGC
GCGGGCGGCA AGGTGCAGGC GATAGGCACG CTGGCGCCGA ACCCGCTCGG GCTGCACGAC
ATGCTGGGCA ACGTCTCGGA ATATGTCCTG ACCCCCTTCG CGATGGTGCG CCACGGGCGG
CTGCACGGGC AGGCCGGCGG CTACGTCAAG CGCGGCGGCG ATGCACGCAC GCCGCTCGAC
CAGATCACCA GCGCGACCCG GTTCGAGGTG CCGCCCTTCG ACGCGCATTC GAAGGATGTG
ACGCGCGAGG CTTTCACCGG GGGGCGGCTC GTGCTGTCCA CGCTCTCGAT CACCTCGGCC
GAGCAGGCGA AGGCGGTCGC GGCGGCGCTC GAGACCCTGT CGCGGGCCGA CCCTGCGCTC
GACTCGGCGG CCTCGGAGGC CGAGGTTCTG GCGCTGCTCG ACCGGCTTCA GCGCGAGGCC
GGCGATGCCG CCGACCGCAG CCGCTTTGCC ACCATCGCCC GGACGATCCG CGAGGCCCGC
GCCGAGACGA ACGCGCAGCG CGACCGGACC ATCCGGATGA TCCTCGGCTC GTCGGTGCTG
ACCTGCGACC AGATCGTGCA GCGCTACCTG AACGCGCTGG CCATCGCGGC GCTGGTGCCG
AGCTATGACG GGCTGGCCGC CGAGGCCGAG GCCAGCGGCG ACACCGCACT GGCGCAGGAG
GTGGCCGAGG CCCGCGCCGA AGCAGAGGCG AAGCTGCGCG AGATGGAGGA GGCGGTCGGC
CGCGAAAGCG TCGACTACGC CAACATGATC GAGGGGCTTT CGGCCGAATT CTCGCAGGAG
CTGCTGGCGG CGCAGATCGC GGCCGTGCGG GGCGAGCACG AGAGCCGCGG CCCTCGGCGC
GGTGCCTGCC TCGGCGCGGT GCAGGCCCAT CTCGACCGGC GGGCCCGGAG CGGGATGAAC
GACCTCGCCG CCATCCGGTC CGACATGCAA CAGATCGCGG CCGCGCAGGC CCGCTAA
|
|---|
| Protein sequence | MARAWGFALA ILLAAPPAAA GGITVDETYW NPQPAEGDLV LPMPCGGAMA FRPVATPNAD
GAVGDVPVIL GREDEDQPYL DGTRRSYVSG GFPGTGEAEA KAMFYMAKYE IAEAQYRAVT
EGCPQKEPRR RDFLPVTGVT KTELDAFAQA WTVWLMRNAP ESLALAGAAP AHLRLPTEEE
WEFAARGGLA VDPALFRGAL PPIPPGHSAS EYIAHGGNDS AGGKVQAIGT LAPNPLGLHD
MLGNVSEYVL TPFAMVRHGR LHGQAGGYVK RGGDARTPLD QITSATRFEV PPFDAHSKDV
TREAFTGGRL VLSTLSITSA EQAKAVAAAL ETLSRADPAL DSAASEAEVL ALLDRLQREA
GDAADRSRFA TIARTIREAR AETNAQRDRT IRMILGSSVL TCDQIVQRYL NALAIAALVP
SYDGLAAEAE ASGDTALAQE VAEARAEAEA KLREMEEAVG RESVDYANMI EGLSAEFSQE
LLAAQIAAVR GEHESRGPRR GACLGAVQAH LDRRARSGMN DLAAIRSDMQ QIAAAQAR
|
|---|
| |