| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3791 |
|---|
| Symbol | |
|---|
| ID | 4899003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 917580 |
|---|
| End bp | 918920 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640114395 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001045643 |
|---|
| Protein GI | 126464530 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.712407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.636512 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATG CGCTCGCCAC GCTCTTCGCC CGGATGGCCG CGGCGGGGGG CAAGACCGCG
CTGATCGAGG CCGACGGCAC GGCGGTTTCC TACGCCACGC TCCTCCGCCG GGTGGAGGAG
GCCGCGGCGC GACTGGCCCG CGAGGGCGTG CCGCGCGGCG CCTCGGTCCA GCTCTGCGGC
GATTTCGGCG CGGCCTCCGT GGTCTGGCTG CTCGCGCTCT GGCGGCACGG GGCCTGCGTC
TCGCCGGTGG CGCCCACGAG TTCCGAGCGG CGCGCGGACT TCGCCGCCGT GGCCCGGGCG
GGCTGGCGGA TCGAGGCGGC GGACGAGCGG CTGGAGCGGC TGGGCGGCGG CTCGGACCAT
CCGCTCCTCG ACCGGCTCCG CGCCGAGGAG GCGCCTGGGC TCGTCATCTT CACCTCCGGC
ACGACCGGGG CGCCCAAGGG CGCCGTCCAT GACGTGCGCC GCCTCCTCGG CAAGTTCGCC
GCTCCCGGCA AGGATCTGGT GACGCTGGCC TTCCTGCTCT TCGACCATAT CGCCGGGATC
GACACGCTCC TCTATGCGCT GTCGAACGGC TCGACGCTCG TCTGCCTGCC CGACCGGTCC
GTGCCCACGG TGATCGACCG CATCCGCCGC CATCGGGTCG AGGTGCTGCC CACCGCGCCC
TCGTTCCTCA ACCTCCTGCT CCTGAACGCG GGCGAGGGCC TGTCGCTGCC CAGCCTGCGC
ATCGTGACCT ACGGCGCCGA GACCATGCCG CAGGCGCTGC TCGAGCGGCT GGCCGACGCG
CTGCCCGGCG TGCAGCTGAT CCAGAAATAC GGCACTTCCG AGCTCGGCGC CCTGCGGTCG
CGCTCCGAGG GCGGGCGGTC GCTCTGGATC CGGCTCGAGG GGGCCGGGGC CGCCTGGCGC
GTGGTCGAGG GCCGGCTCGA GATCCGCACC GCGACCGCGA TGCTGGGCTA TCTGAACGCG
CCCGATCCCT TCACCGCGGA CGGCTGGTAT CGAACCGGCG ATCTGGTCGA GGTGGAGGGC
GACCGGCTGC GGTTCCTCGG CCGGGCGGGC GACACGATCA ACGTGGGCGG CCAGAAGGTG
CTTCCCGCCG AGGTCGAAGG CGCGCTTCTG GCGCTGCCGG GCGTGGCCGA GGCCGCCGTC
CATGGCGCGC CGCATCCGAT CCTCGGCGCG GTCGTCGTGG CCCGGGTGCG GATGGCCGAG
GCAGGCCTCG CCCCGGCCGA GCAGCGCGCG GCCCTGCGGC GGGGGCTCGC CGGAGGGCTC
GAAGCCTACA AGATCCCCCA GAAGATCGAG ATCGTGACCG AGGCGCTGAC GACCGAGCGG
TTCAAGCAGA AGCGGGGCTG A
|
|---|
| Protein sequence | MADALATLFA RMAAAGGKTA LIEADGTAVS YATLLRRVEE AAARLAREGV PRGASVQLCG
DFGAASVVWL LALWRHGACV SPVAPTSSER RADFAAVARA GWRIEAADER LERLGGGSDH
PLLDRLRAEE APGLVIFTSG TTGAPKGAVH DVRRLLGKFA APGKDLVTLA FLLFDHIAGI
DTLLYALSNG STLVCLPDRS VPTVIDRIRR HRVEVLPTAP SFLNLLLLNA GEGLSLPSLR
IVTYGAETMP QALLERLADA LPGVQLIQKY GTSELGALRS RSEGGRSLWI RLEGAGAAWR
VVEGRLEIRT ATAMLGYLNA PDPFTADGWY RTGDLVEVEG DRLRFLGRAG DTINVGGQKV
LPAEVEGALL ALPGVAEAAV HGAPHPILGA VVVARVRMAE AGLAPAEQRA ALRRGLAGGL
EAYKIPQKIE IVTEALTTER FKQKRG
|
|---|
| |