Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3766 |
Symbol | |
ID | 4898752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 887935 |
End bp | 888786 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640114371 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001045619 |
Protein GI | 126464506 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATCCT CATTGCGCAC CACCCTGTTT CTTGCGCCGG CCACGGCCTG GCTCCTGTGC ATGCTGGTGC TGCCGCTGGT GGTCGTCATC GTCTTCAGCT TCGGCGAAAG GGGGGCCGCG GGCGGCTACG TCCCGGCCTT CACCCTGGAC AATTACGCCA ACCTCGGCTC CCGCTGGGGC GCCTTCCGCA ACACGCTCAC CCTCGCTCCG CTGGGCACGG TGCTCTGCCT GGTCATCGCC TGGCCGCTTG CCTATTTCCT GGCGCTGAAG GCCGACCCGC GCTGGCGGAC GCTGCTGCTG ATCCTCGTGA TCGTGCCGTT CTGGACCTCG ATCCTGATCC GCTCCTATGC CTGGATCCAG ATCCTCGGCG GCAACGGCCT GCCCTCGATC ATCGCGAGCC TCGGTCTGCC GCGCCCCCGC CTGATCAACA CGCCCTTCGC CGTGATGGTG GGCATCGTCT ACGGCTATCT GCCGCTGATG GTCTTCCCGA TCTATGTCGC GCTGGAAAAG CTCGACCGGC GGTTGCTGGA GGCCTCGGCC GATCTCGGCA GCCCGCCCTG GCGCACCTTC CTGCAGGTGA CGCTGCCCCT GTCGATGGCG GGCGTGGCGA CAGGCTCCAT GCTCGTCTTC ATCCTGCTGA TGGGCGAATT CCTGATCCCG CAGATCCTCG GCGGCGGCAA GGTGTTCTTC GTCGGCAACG CCCTGGTGGA CCTGTTCCTG CAATCGAGGA ACTGGCCCTT CGGCGCCGCG GTCGCCGCCG TGCTGGTGAT CGTGATGCTG ATCGCCGTGA CGCTCTATCT GAAGGCCATC AAGCGGGTCT CGGGCGGGCG TGACGATGTC GCCCTGATGT GA
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Protein sequence | MRSSLRTTLF LAPATAWLLC MLVLPLVVVI VFSFGERGAA GGYVPAFTLD NYANLGSRWG AFRNTLTLAP LGTVLCLVIA WPLAYFLALK ADPRWRTLLL ILVIVPFWTS ILIRSYAWIQ ILGGNGLPSI IASLGLPRPR LINTPFAVMV GIVYGYLPLM VFPIYVALEK LDRRLLEASA DLGSPPWRTF LQVTLPLSMA GVATGSMLVF ILLMGEFLIP QILGGGKVFF VGNALVDLFL QSRNWPFGAA VAAVLVIVML IAVTLYLKAI KRVSGGRDDV ALM
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