Gene Rsph17029_3766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3766 
Symbol 
ID4898752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp887935 
End bp888786 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content66% 
IMG OID640114371 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001045619 
Protein GI126464506 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCCT CATTGCGCAC CACCCTGTTT CTTGCGCCGG CCACGGCCTG GCTCCTGTGC 
ATGCTGGTGC TGCCGCTGGT GGTCGTCATC GTCTTCAGCT TCGGCGAAAG GGGGGCCGCG
GGCGGCTACG TCCCGGCCTT CACCCTGGAC AATTACGCCA ACCTCGGCTC CCGCTGGGGC
GCCTTCCGCA ACACGCTCAC CCTCGCTCCG CTGGGCACGG TGCTCTGCCT GGTCATCGCC
TGGCCGCTTG CCTATTTCCT GGCGCTGAAG GCCGACCCGC GCTGGCGGAC GCTGCTGCTG
ATCCTCGTGA TCGTGCCGTT CTGGACCTCG ATCCTGATCC GCTCCTATGC CTGGATCCAG
ATCCTCGGCG GCAACGGCCT GCCCTCGATC ATCGCGAGCC TCGGTCTGCC GCGCCCCCGC
CTGATCAACA CGCCCTTCGC CGTGATGGTG GGCATCGTCT ACGGCTATCT GCCGCTGATG
GTCTTCCCGA TCTATGTCGC GCTGGAAAAG CTCGACCGGC GGTTGCTGGA GGCCTCGGCC
GATCTCGGCA GCCCGCCCTG GCGCACCTTC CTGCAGGTGA CGCTGCCCCT GTCGATGGCG
GGCGTGGCGA CAGGCTCCAT GCTCGTCTTC ATCCTGCTGA TGGGCGAATT CCTGATCCCG
CAGATCCTCG GCGGCGGCAA GGTGTTCTTC GTCGGCAACG CCCTGGTGGA CCTGTTCCTG
CAATCGAGGA ACTGGCCCTT CGGCGCCGCG GTCGCCGCCG TGCTGGTGAT CGTGATGCTG
ATCGCCGTGA CGCTCTATCT GAAGGCCATC AAGCGGGTCT CGGGCGGGCG TGACGATGTC
GCCCTGATGT GA
 
Protein sequence
MRSSLRTTLF LAPATAWLLC MLVLPLVVVI VFSFGERGAA GGYVPAFTLD NYANLGSRWG 
AFRNTLTLAP LGTVLCLVIA WPLAYFLALK ADPRWRTLLL ILVIVPFWTS ILIRSYAWIQ
ILGGNGLPSI IASLGLPRPR LINTPFAVMV GIVYGYLPLM VFPIYVALEK LDRRLLEASA
DLGSPPWRTF LQVTLPLSMA GVATGSMLVF ILLMGEFLIP QILGGGKVFF VGNALVDLFL
QSRNWPFGAA VAAVLVIVML IAVTLYLKAI KRVSGGRDDV ALM