| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3653 |
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| Symbol | |
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| ID | 4898304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | + |
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| Start bp | 753816 |
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| End bp | 755177 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640114261 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001045515 |
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| Protein GI | 126464402 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0983675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTGG AAGAGCTCTA TGTCGCCGGC CTGTTCGGGA CCTTCGTCCT GCTCCTCATG
ACCGGCTTCC CAGTCGCCTG GGTGCTGGGC GGCACCTCGG TGATCTGGAC CGTCATCGGC
GTCCTCTCGG TCGAGCAGTT CGGGGCCGAC CTCTGGTTCG ATTACGACTC GTCGCTCGCG
CTGCTCCCGG AGCGGATCTG GGGCAATGTC GAGAGTCAGG CCCTCGTGGC CCTGCCGATG
TTCACCTTCA TGGGTATCAT GCTCGACCAG TCGGGCATCG CCGAGCGGCT GATGCACGAC
ATGGTGCGCC TCTTCGGCCG GGTGCGCGGC GGCTATGCCG TGACCGTCAT CATCATCGGC
GTCCTGCTGG CCGCCACCAC CGGCATCATC GGCGCCTCTG TGGTGCTGCT CGGGATGCTG
TCGCTGCCCA CGATGATGGA GAACAACTAT TCGCGCAGTT TCGCCGCCGG AACGGCCTGC
GCCACCGGCA CGCTGGGCAT CCTGATCCCG CCCTCGATCA TGCTGGTGAT GATGGCCGAC
CGTCTCGCCA CGCCCGAGGC CTCGGTCGGG GCGCTCTTCA TGGGGGCCTT CATCCCCGGG
CTGATGCTGG GGCTGCTCTA TATCGCCTAT GCGATCATCC GGCCGCTGTT CCAGCCCTCC
ATCGCGCCGA CGCCGGCCAA CCCCGAGCGG ATCACGCTGC GGCTGGTGTT CGACACGGTG
CTGGCCATCG TGCCTACGGC CGTGCTGATC CTGAGTGTGC TGGGCTCGAT CTTCATGGGG
ATCGCCACGC CGACCGAGGC CTCAGGCGTG GGCGCCTTCG GCGCGCTGCT CCTCGCGGCC
CTCAACCGGC GTCTGACCCT GCCGGTGCTG CGCCGGTCGC TCTATGCCAC GACCCGGACG
ACCGCCTTCA TCTTCGGCAT CTTCCTCGGC GCCACCGCCT TTTCCGTGGT CCTGCGCGGG
CTTGGCGGCG ACGAAGTCAT CGAGGCCGCG CTCCTCGGTC TGCCCTTCGG GCCGAACGGC
ATCGTGATCG CCATCCTCTT CGCTGTGTTC ATCCTCGGCT TCTTCCTCGA CTGGATCGAG
ATCACCCTGA TCGTGCTGCC CCTCGTGGCG CCCGCGGTCC AGCAACTCGG CTTCGATCTG
GTCTGGTTCA CGATCCTCTT CGCGATCTGC CTGCAGACAT CGTTCCTGAC ACCGCCGGTG
GGCTTCGCGC TCTTCTACAT CAAGGGCGTG GCGCCGCCCG AGATCACCGT GCTCGACATC
TACAAGGGCG TGGTGCCCTA CATCCTGATC CAGCTCTTCG CGCTGGCGTT GGTGTTCGCC
TTCCCGGCGC TGGCGGTCTG GCTGCCCGCC ATGTCGCGCT GA
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| Protein sequence | MLLEELYVAG LFGTFVLLLM TGFPVAWVLG GTSVIWTVIG VLSVEQFGAD LWFDYDSSLA
LLPERIWGNV ESQALVALPM FTFMGIMLDQ SGIAERLMHD MVRLFGRVRG GYAVTVIIIG
VLLAATTGII GASVVLLGML SLPTMMENNY SRSFAAGTAC ATGTLGILIP PSIMLVMMAD
RLATPEASVG ALFMGAFIPG LMLGLLYIAY AIIRPLFQPS IAPTPANPER ITLRLVFDTV
LAIVPTAVLI LSVLGSIFMG IATPTEASGV GAFGALLLAA LNRRLTLPVL RRSLYATTRT
TAFIFGIFLG ATAFSVVLRG LGGDEVIEAA LLGLPFGPNG IVIAILFAVF ILGFFLDWIE
ITLIVLPLVA PAVQQLGFDL VWFTILFAIC LQTSFLTPPV GFALFYIKGV APPEITVLDI
YKGVVPYILI QLFALALVFA FPALAVWLPA MSR
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