Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3623 |
Symbol | |
ID | 4898102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 715214 |
End bp | 716428 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640114231 |
Product | mandelate racemase/muconate lactonizing protein |
Protein accession | YP_001045485 |
Protein GI | 126464372 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.498648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.36382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCA CCGCGATCAG GACCTACCGG GTCGAGGAAT TCGCGAACGT TCTGTGGGTC CATGTCGAGA CCGACGCGGG CGTCACGGGG CTCGGCGAGA CCTTCTACGG CGCCGAGGCC TGCGAGGCGC ATATCCACAA TACGCTCGCC GTCCGCCTGC TGGGCCAGAA CCCGCTGAAC ATCGAGCTTC TGCACAAGGA GATGGTGTCG CTGCCCAATG CCCAGGCCTC GACCGGGGTG GAATATCGCG CGGCCTCGGC GGTGGATATC GCGCTGTGGG ACATCTTCGG CAAGGTGGCG GGCCAGCCCG TGCACATGAT GCTCGGCGGC CAGAGCTGGG ACCGGATGCG GATCTACAAC ACCTGCGCCG GCACCCGCTA TGTGCGGACG AACAAGATCA AGCCGGTCGA CACCTGGAAC CTTGCCGCAG GAGGGGCCGA GGCGCCCTCG CCGTATGAGG ATCTCGACGC CTTCATGACC CGCGCAGGCG AGCTTGCCGA GGATCTGCTC TCGAACGGCA TCACCGCCAT GAAGATCTGG CCCTTCGATC CGGCGGCGAT CGAGAACAAG GGCATGTTCA TCACGGCCGA GCAGATGAAG ACCGCGATCC GGCCCTTCGA GCTGATCCGC AAGGCGGTGG GCGACCGGAT GGAGATCATG GTCGAGATGC ACAGCCTCTG GAACCTGCCG GTCGCCATGG ACATCGCCCG GGCGCTCGAG CCCTACCAGC CGCGCTGGTT CGAGGATGCG ATCCGCATGA ACTCGCCGCA GGCGCTGGCC GAGTTCGCAC GCTCGACCAC GACATGGACC TGCGCCTCCG AGACGCTGGG CTCGCGCTTC GCCTACAAGG AATATCTCGA CCGGGATGCC ACCCATGTGG TGATGGCCGA CCTCTGCTGG ACCGGCGGGC TGACCGAGGG CCGCAAGATC GCGGCGATGG CCGACACCTA CCACCGCCCC TTCGCGCCGC ATGACTGCAT CGGCCCCGTG GGCTTCGCCG CCGCGATCCA CATGTCGATC AGCCAGCCGA ACACGCTGAT CCAGGAGTCG GTGCGCGCCT TCTACAGGGG CTGGTACCGC GAGCTCGTCA CCGAGGTGCC GCGGATCGAG GGCGGCTATG TCTATCCGAT GGAAGGCCCC GGGCTCGGCA CCGAGCTCGT GCCGCAGTTC TTCGACCGCT CCGACCTTTC CCACCGTCTG TCCGAGGCCG CCTGA
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Protein sequence | MKITAIRTYR VEEFANVLWV HVETDAGVTG LGETFYGAEA CEAHIHNTLA VRLLGQNPLN IELLHKEMVS LPNAQASTGV EYRAASAVDI ALWDIFGKVA GQPVHMMLGG QSWDRMRIYN TCAGTRYVRT NKIKPVDTWN LAAGGAEAPS PYEDLDAFMT RAGELAEDLL SNGITAMKIW PFDPAAIENK GMFITAEQMK TAIRPFELIR KAVGDRMEIM VEMHSLWNLP VAMDIARALE PYQPRWFEDA IRMNSPQALA EFARSTTTWT CASETLGSRF AYKEYLDRDA THVVMADLCW TGGLTEGRKI AAMADTYHRP FAPHDCIGPV GFAAAIHMSI SQPNTLIQES VRAFYRGWYR ELVTEVPRIE GGYVYPMEGP GLGTELVPQF FDRSDLSHRL SEAA
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