Gene Rsph17029_3604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3604 
Symbol 
ID4898339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp696149 
End bp696793 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID640114212 
ProductGntR family transcriptional regulator 
Protein accessionYP_001045466 
Protein GI126464353 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.463907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGA CCCCCAAAGC CCGCGACATC AGCCACACCG TGTATGAGCA GGTGCGCGAC 
GCCATCCACA GCGGCGAGTT CAAGGTCGGC GAACGTGTGA CCGAAGTGGC GCTCGCCGAG
AAGTTCGGCG TCTCACGGAC GCCGATCCGC GAGGCGATCT CGAAGCTCGA GATCGACGGG
CTGCTCACCA ACGTGCCCCG GCGCGGGCTC ATCATCACCG ACCTCAGCCA CCAGCAGATC
GGCGAGCTCT ACATGATGCG CGAGGTGCTG GAGGGGGCGG CCGCGCGGCT GGCCGCGCTG
TCGGGCAGCG ATGTCGAGCT CACCGCCCTC AAGGATCTGG TCGCGATGGA GGCGGGCGCG
CTGGACGATC CGCAGCAGCT CTCCGAAATC AACAAGCGGT TTCACCGGCT GCTCGCGCTG
GCAGCCCACA ACCGCTATCT GCTGGTGGCG CTCGAGCAGC TTTCGGTCAC CATGTCCCTC
TTGCCGAGCC TGTTGGGCGA AGGCGCCCGC GCGCGTTCGG CCCACGACCA GCATATCCAG
ATCGTCGAGG CGCTGCAGAC GCGCGATCCG GACGCGGCCG AGCAGGCGAT CCGCCAGCAT
ATCCGCGCGT CGCACCAGCA CCGCCTGATG CTGGCCGCAA CCTGA
 
Protein sequence
MTKTPKARDI SHTVYEQVRD AIHSGEFKVG ERVTEVALAE KFGVSRTPIR EAISKLEIDG 
LLTNVPRRGL IITDLSHQQI GELYMMREVL EGAAARLAAL SGSDVELTAL KDLVAMEAGA
LDDPQQLSEI NKRFHRLLAL AAHNRYLLVA LEQLSVTMSL LPSLLGEGAR ARSAHDQHIQ
IVEALQTRDP DAAEQAIRQH IRASHQHRLM LAAT