Gene Rsph17029_3467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3467 
Symbol 
ID4898097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp543713 
End bp544690 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content65% 
IMG OID640114064 
Productinner-membrane translocator 
Protein accessionYP_001045332 
Protein GI126464219 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC TGCATTCCAC CGAATTCGTG ATCGCCCTCG TGCTTCTGGC CGCGATGGTG 
CTGATCGGTC TCGTGAACCC GGCCTTCTGG GGTCTGGACA ACCTCTTCAG CCTGGCGAAA
TCGAACGTCG TCATCGGCAT CATGGCCCTG GGCGTGCTGC TCGTGATGAT CTCGGGCGGC
ATCGACGTGT CGTTTCCGGC CATCGCGGTG GCGGCGCTCT ATATCGTCGT GCGCGCCATG
GTCGAGCTGA ACTACGACGG GGTGTTCATT CCCTTCCTCG CCGCGGCCGC GATCGGCCTC
GTGCTCGGAG GCTTCAACGC CTTCATCATC GAGCGCTTCC GGATGATCCC GCTGATCGTG
ACGCTCGGCA CCGCCTCGAT CGTGCGCGGC CTCGTGCTGG GGCTTCTGGG CAGCTCCATC
GTCAATATCA ACAAGATGCC GAAGGAGCTG ATCGAGTTCG GCCGCCACGA CCTGATGACG
GTCGAGGCCG CGAACGGGGC GACCTACGGG CTGACCTCGA TGGTGCTGGT CTATCTCGGC
ATCGCGCTCG TCATGCATCT GGTGCTGCGG CACACGATGA TCGGCCGCTC GGTCTATGCC
TACGGCACGG ATGCGGAATC GGCGCGCCGG GCGGGCTTCA ACACCCGCCG GACGATCTGG
TTCGTCTATT GCCTCGCGGG GCTGCTCGCG GGCTTTGCCG GGATGCTCCA CACCTCGATG
ATCTGGCAGG CCAACCCGCG CGACTTCCAG GGGCTCGAGC TCGACGTGAT CGCGGCCGTG
GTGCTGGGCG GCGCCTCGAT CTTCGGCGGC CGCGGCTCGG TCGCGGGCAC GCTGATCGGG
GTGTTCATGC TGGTGATGGT CAAGAACTCG CTGATCCTGC TGAAGGTGGA CACGACCTGG
CAGCGGGTGG TCGTGGGCCT CATCATCGTC GCCGCGACCG CCATCACCGC CTGGCGCGAC
CGCAAGAAGC TGGCCTGA
 
Protein sequence
MKILHSTEFV IALVLLAAMV LIGLVNPAFW GLDNLFSLAK SNVVIGIMAL GVLLVMISGG 
IDVSFPAIAV AALYIVVRAM VELNYDGVFI PFLAAAAIGL VLGGFNAFII ERFRMIPLIV
TLGTASIVRG LVLGLLGSSI VNINKMPKEL IEFGRHDLMT VEAANGATYG LTSMVLVYLG
IALVMHLVLR HTMIGRSVYA YGTDAESARR AGFNTRRTIW FVYCLAGLLA GFAGMLHTSM
IWQANPRDFQ GLELDVIAAV VLGGASIFGG RGSVAGTLIG VFMLVMVKNS LILLKVDTTW
QRVVVGLIIV AATAITAWRD RKKLA