| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3465 |
|---|
| Symbol | |
|---|
| ID | 4898119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 541083 |
|---|
| End bp | 542129 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640114062 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_001045330 |
|---|
| Protein GI | 126464217 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCA TGCTGACGTC AGCGGCGCTG GCGCTGTCGG TTCTGGCCGC GCCCGCCGTG
GCTCAGGACA TCGTCGACGT GTCCAAGGTC AACAAGGAGC TGATCACGAC GAAGGACGGC
AAGGAATATT CCATCGCCAC CGTCGTGAAG GTGGACGGCA TCGCCTGGTT CGACCGGATG
CGCGACGGGA TCACCCAGTT CCAGAAGGAC ACCGGCCACG ACGTCTGGAT GGTGGGCCCG
AGCCAGGCCG ACGCGGCGGC GCAGGTGCAG CTGATCGAGA ACCTGATCGC GCAGGGCGTG
GATGCGATCT GCGTGGTGCC CTTCTCGGTC GAGGCGGTGG AGCCGGTGCT GAAGAAGGCG
CGCGACCGGG GCATCGTGGT CATCACCCAC GAGGCGTCGA ACATCCAGAA CACCGACTTC
GACCTCGAGG CCTTCGACAA CCTCGCCTAT GGCGCGAACC TGATGAAGGA ACTCGCCAAA
TCCATGGGCG AGAAGGGCAA ATACGTCGCC ACCGTCGGCT CGCTCACCTC GAAGAGCCAG
ATGGAATGGA TCGACGGCGC GGTGGCCTAC CAGAAGGAGC ATTACCCCGA GATGAGCCTC
GTGGGCGACC GTCTGGAGAC CGCCGACGAC GCGGCCATCG ACTATACCAA GCTCAAGGAA
GCGATGACCA CCTATCCCGA CATCACGGGG ATCCTCGGCG CGCCGATGCC GACCTCGGCC
GGGGCCGGTC GCCTGATCGC CGAGAGCGGG CTGAAGGACA AGGTCTTCTT CGCGGGCACG
GGCCTGCCGT CGGTCGCGGG CGAATATCTG CAGAACGGCG ACATCCAGTA TATCCAGTTC
TGGGATCCGG CGGTCGCGGG CTATGCGATG AACATGCTGG CCGTGGCGGC CCTCGAGGGC
AAGAAGGACG AGATCAAGCC GGGCCTGAAC CTCGGCCTCG CGGGCTACGA GGAGTTGACC
GCGCCGGACG CGGCCAACCC GCATCTGCTC TATGGCGCAG GCTGGGTCGG CGTGACCAAG
GACAACATGG CCGACTACGA CTTCTGA
|
|---|
| Protein sequence | MKIMLTSAAL ALSVLAAPAV AQDIVDVSKV NKELITTKDG KEYSIATVVK VDGIAWFDRM
RDGITQFQKD TGHDVWMVGP SQADAAAQVQ LIENLIAQGV DAICVVPFSV EAVEPVLKKA
RDRGIVVITH EASNIQNTDF DLEAFDNLAY GANLMKELAK SMGEKGKYVA TVGSLTSKSQ
MEWIDGAVAY QKEHYPEMSL VGDRLETADD AAIDYTKLKE AMTTYPDITG ILGAPMPTSA
GAGRLIAESG LKDKVFFAGT GLPSVAGEYL QNGDIQYIQF WDPAVAGYAM NMLAVAALEG
KKDEIKPGLN LGLAGYEELT APDAANPHLL YGAGWVGVTK DNMADYDF
|
|---|
| |